Jatropha Genome Database

JcCB0107371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0107371.10 + phase: 0 /partial
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04480.1                                                       186   4e-48
Glyma11g12280.1                                                       180   3e-46
Glyma06g01280.3                                                       176   6e-45
Glyma06g01280.2                                                       176   6e-45
Glyma06g01280.1                                                       176   6e-45
Glyma04g01240.1                                                       171   1e-43
Glyma08g36530.1                                                        91   2e-19

>Glyma12g04480.1 
          Length = 526

 Score =  186 bits (473), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 86/109 (78%), Positives = 94/109 (86%)

Query: 8   NGELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRX 67
           NGELSCQMYQRSADMGLGVPFNIASYALLTC+++HVCDLVPGDF+HV+GDAHVYR HVR 
Sbjct: 418 NGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRP 477

Query: 68  XXXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMAI 116
                        ILKINP+KK+IDSFVAADFKLIGYDPHQKIEMKMA+
Sbjct: 478 LQEQLQNQPKPFPILKINPKKKDIDSFVAADFKLIGYDPHQKIEMKMAV 526


>Glyma11g12280.1 
          Length = 503

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 92/108 (85%)

Query: 8   NGELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRX 67
           NGELSCQMYQRSADMGLGVPFNIASYALLTC+++HVCDLVPGDF+HV+GDAHVYR HVR 
Sbjct: 396 NGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRP 455

Query: 68  XXXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMA 115
                        ILKINP+KK+IDSFVA+DFKLIGY PHQKIEMKMA
Sbjct: 456 LQEQLQNQPKPFPILKINPKKKDIDSFVASDFKLIGYVPHQKIEMKMA 503


>Glyma06g01280.3 
          Length = 530

 Score =  176 bits (445), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 92/108 (85%)

Query: 9   GELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRXX 68
           GELSCQMYQRSADMGLG+PFNIASYALLTC+++HVCDL+PGDF+HV+GDAH+YR HVR  
Sbjct: 423 GELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPL 482

Query: 69  XXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMAI 116
                        LKINP+KK+IDSFVAADFKLIGYDPHQKI+MK+++
Sbjct: 483 QEQLHNQPKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530


>Glyma06g01280.2 
          Length = 530

 Score =  176 bits (445), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 92/108 (85%)

Query: 9   GELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRXX 68
           GELSCQMYQRSADMGLG+PFNIASYALLTC+++HVCDL+PGDF+HV+GDAH+YR HVR  
Sbjct: 423 GELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPL 482

Query: 69  XXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMAI 116
                        LKINP+KK+IDSFVAADFKLIGYDPHQKI+MK+++
Sbjct: 483 QEQLHNQPKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530


>Glyma06g01280.1 
          Length = 530

 Score =  176 bits (445), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 92/108 (85%)

Query: 9   GELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRXX 68
           GELSCQMYQRSADMGLG+PFNIASYALLTC+++HVCDL+PGDF+HV+GDAH+YR HVR  
Sbjct: 423 GELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPL 482

Query: 69  XXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMAI 116
                        LKINP+KK+IDSFVAADFKLIGYDPHQKI+MK+++
Sbjct: 483 QEQLHNQPKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530


>Glyma04g01240.1 
          Length = 535

 Score =  171 bits (434), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 91/108 (84%)

Query: 9   GELSCQMYQRSADMGLGVPFNIASYALLTCIVSHVCDLVPGDFVHVLGDAHVYRTHVRXX 68
           GELSCQMYQRSADMGLGVPFNIASYALLTC+++HVCDL+PGDF+HV+GDAHVY  HVR  
Sbjct: 428 GELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHVYCNHVRPL 487

Query: 69  XXXXXXXXXXXXILKINPEKKNIDSFVAADFKLIGYDPHQKIEMKMAI 116
                        L+INP+KK+IDSFVAADFKLIGYDPHQKI+MK+A+
Sbjct: 488 QEQLHNQPKPFPTLEINPKKKDIDSFVAADFKLIGYDPHQKIDMKLAV 535


>Glyma08g36530.1 
          Length = 77

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 53/77 (68%)

Query: 39  IVSHVCDLVPGDFVHVLGDAHVYRTHVRXXXXXXXXXXXXXXILKINPEKKNIDSFVAAD 98
           IV  + DL+P DF+HV+ DAHVY  HVR               L+INP+ K+IDSFVA D
Sbjct: 1   IVFFLSDLIPSDFIHVIRDAHVYHNHVRPLQEKLHNQPKPFPTLEINPKMKDIDSFVAVD 60

Query: 99  FKLIGYDPHQKIEMKMA 115
           FKLIGYDPHQKI+MK+A
Sbjct: 61  FKLIGYDPHQKIDMKLA 77