Jatropha Genome Database

JcCB0106871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0106871.10 + phase: 0 /pseudo/partial
         (219 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g41160.1                                                       158   5e-39
Glyma10g41160.2                                                       157   6e-39
Glyma20g26110.1                                                       155   3e-38
Glyma03g40640.1                                                       119   2e-27
Glyma19g43310.1                                                       119   3e-27
Glyma08g22920.1                                                        71   7e-13
Glyma15g20740.1                                                        70   2e-12
Glyma03g23200.1                                                        66   2e-11
Glyma03g26420.1                                                        60   2e-09

>Glyma10g41160.1 
          Length = 266

 Score =  158 bits (399), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 19/175 (10%)

Query: 1   DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
           D+LKKIAAY+ V++V+SG+VLGL   ST K+ +DRI  LL       + +GIPTS KTH+
Sbjct: 33  DDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLK-DIVGIPTSTKTHE 91

Query: 61  HALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIE------ILLTS 114
            AL LGIPLSDLD+HP +DL  +  D+VD +LNL+KGRGGSLLREKM+E      I++  
Sbjct: 92  QALSLGIPLSDLDAHPAIDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFIVIVD 151

Query: 115 Q----NWFLILELIKPAETLPFCWKFT--------QERCLVAKLRRNGDSKNGEP 157
           +    N+     L  P E + FCW+FT        +E   VA+LR  G+ +  EP
Sbjct: 152 ESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFEEAGCVARLRTFGEKEKEEP 206


>Glyma10g41160.2 
          Length = 251

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 19/175 (10%)

Query: 1   DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
           D+LKKIAAY+ V++V+SG+VLGL   ST K+ +DRI  LL       + +GIPTS KTH+
Sbjct: 18  DDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLK-DIVGIPTSTKTHE 76

Query: 61  HALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIE------ILLTS 114
            AL LGIPLSDLD+HP +DL  +  D+VD +LNL+KGRGGSLLREKM+E      I++  
Sbjct: 77  QALSLGIPLSDLDAHPAIDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFIVIVD 136

Query: 115 Q----NWFLILELIKPAETLPFCWKFT--------QERCLVAKLRRNGDSKNGEP 157
           +    N+     L  P E + FCW+FT        +E   VA+LR  G+ +  EP
Sbjct: 137 ESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFEEAGCVARLRTFGEKEKEEP 191


>Glyma20g26110.1 
          Length = 303

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 106/165 (64%), Gaps = 19/165 (11%)

Query: 1   DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
           D+LKKIAAY+ V++V+SG+VLGL   ST K+ +DRI  LL       + +GIPTS KTH 
Sbjct: 72  DDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLK-DIVGIPTSTKTHD 130

Query: 61  HALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIE------ILLTS 114
            AL LGIPLSDLDSHP VDL  +  D+VD +LNL+KGRGGSLLREKM+E      I++  
Sbjct: 131 QALSLGIPLSDLDSHPTVDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFIVIVD 190

Query: 115 Q----NWFLILELIKPAETLPFCWKFT--------QERCLVAKLR 147
           +    N+     L  P E + FCW+FT        QE   VAKLR
Sbjct: 191 ESKLVNYLGGSGLAMPVEVIQFCWRFTAARLQKLFQEAGCVAKLR 235


>Glyma03g40640.1 
          Length = 281

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 15/152 (9%)

Query: 1   DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
           D+LK++AA + V+ V+SG+VLGL   ST  +V+ ++  LL       + +G+PTSK+T +
Sbjct: 51  DDLKRLAADKAVESVKSGMVLGLGTGSTAAFVVAKLGALL-ASGQLSDIVGVPTSKRTEE 109

Query: 61  HALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIEILLTSQNWFLI 120
            A  LGIPLS LD +P +DL  +  D+VD  LNL+KGRGG+LLREKM+E    S  + ++
Sbjct: 110 QARSLGIPLSVLDDNPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEA--ASDKFVVV 167

Query: 121 LE------------LIKPAETLPFCWKFTQER 140
           ++            L  P E + FCWK+  +R
Sbjct: 168 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLDR 199


>Glyma19g43310.1 
          Length = 281

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 15/152 (9%)

Query: 1   DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
           D+LK++AA + V+ V+SG+VLGL   ST  +V+ ++  LL       + +G+PTSK+T +
Sbjct: 50  DDLKRLAADKAVESVKSGMVLGLGTGSTAAFVVAKLGALL-ASGQLTDIVGVPTSKRTEE 108

Query: 61  HALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIEILLTSQNWFLI 120
            A  LGIPLS LD +P +DL  +  D+VD  LNL+KGRGG+LLREKM+E    S  + ++
Sbjct: 109 QARSLGIPLSVLDHNPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEA--ASDKFVVV 166

Query: 121 LE------------LIKPAETLPFCWKFTQER 140
           ++            L  P E + FCWK+  +R
Sbjct: 167 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLDR 198


>Glyma08g22920.1 
          Length = 212

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 12/121 (9%)

Query: 1   DELKKIAAYEVVDFVQSGIVL--GLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKT 58
           D LK++AA + V+FV+ G+VL  G    ST  +VI ++  LL       + +G+PTSK+T
Sbjct: 50  DYLKRLAANKAVEFVKRGMVLDPGTGTGSTATFVIAKLGTLL-ASGQLIDIVGVPTSKRT 108

Query: 59  HQHALPLGIPLSDLDSHPNVDLDTENTDKVDSYLNLMKGRGGSLLREKMIEILLTSQNWF 118
               L LGIPL  L       L  ++ D+VD  LNL+KG GG+L+ +KM+E    + N F
Sbjct: 109 EDKVLFLGIPLFVLG------LTIDDADEVDPNLNLIKGCGGALVCKKMVE---AASNKF 159

Query: 119 L 119
           +
Sbjct: 160 V 160


>Glyma15g20740.1 
          Length = 75

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
          D+LKKIA Y+VV++V+SG+VLGL   ST K+ +D I  LL       + IGIPTS KTH 
Sbjct: 10 DDLKKIATYKVVEYVKSGMVLGLGTGSTAKHAVDCIGELLR-QGKLKDIIGIPTSTKTHD 68

Query: 61 HALPLGI 67
           AL LGI
Sbjct: 69 QALSLGI 75


>Glyma03g23200.1 
          Length = 82

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
          D+LKKIAAY+VV++V+SG+V GL  DS  K+ +D I+ LL       + IGIPTS K + 
Sbjct: 17 DDLKKIAAYKVVEYVKSGMVFGLGTDSIAKHAVDYISELLR-QGKLKDIIGIPTSTKIYN 75

Query: 61 HALPLGI 67
           AL LGI
Sbjct: 76 QALSLGI 82


>Glyma03g26420.1 
          Length = 72

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 3/63 (4%)

Query: 1  DELKKIAAYEVVDFVQSGIVLGLSADSTTKYVIDRIANLLEXXXXXXNSIGIPTSKKTHQ 60
          D+LKKIAAY+VV++V+SG+VL  S  ST K+V+D I  LL       + IGIPTS KTH 
Sbjct: 13 DDLKKIAAYKVVEYVKSGMVLNTS--STAKHVVDCIGELLR-QGKLKDIIGIPTSTKTHD 69

Query: 61 HAL 63
           AL
Sbjct: 70 QAL 72