Jatropha Genome Database

JcCB0105731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0105731.10 + phase: 0 /partial
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g26150.1                                                       163   4e-41
Glyma02g07200.1                                                       160   3e-40

>Glyma16g26150.1 
          Length = 137

 Score =  163 bits (412), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 85/97 (87%)

Query: 1   KTIAEGRRISTAKACENPTCVEIGDCCSHLKVPFANEIDKAYPRDFMQVGRVRVLLKRED 60
           KT+AEGRRI  AKACENPTC EIGDCCS+LK+PFA EIDKAYPRDFMQ GRVRVLLK+ED
Sbjct: 24  KTMAEGRRIGLAKACENPTCAEIGDCCSYLKLPFAIEIDKAYPRDFMQRGRVRVLLKKED 83

Query: 61  GTLYNPAIPTRKQLMLHIAALVPRHPGRTKKQEPVFT 97
           GTL+N AI +RKQLM+ +A +VPRH GRTKKQ+P  T
Sbjct: 84  GTLFNSAISSRKQLMVKVAEMVPRHHGRTKKQDPAST 120


>Glyma02g07200.1 
          Length = 137

 Score =  160 bits (405), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 83/97 (85%)

Query: 1   KTIAEGRRISTAKACENPTCVEIGDCCSHLKVPFANEIDKAYPRDFMQVGRVRVLLKRED 60
           KT+AEGRRI  AKACENPTC EIGDCCS+LK+PFA EIDKAYPRDFMQ GRVRVLLK+ED
Sbjct: 24  KTMAEGRRIGLAKACENPTCAEIGDCCSYLKLPFAIEIDKAYPRDFMQRGRVRVLLKKED 83

Query: 61  GTLYNPAIPTRKQLMLHIAALVPRHPGRTKKQEPVFT 97
           GTL+N  I +RKQLM+ +A +VPRH GRTKKQE   T
Sbjct: 84  GTLFNSTISSRKQLMVKVAEMVPRHHGRTKKQETSST 120