Jatropha Genome Database
- JcCB0104641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0104641.10 - phase: 1 /partial
(112 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g11610.1 154 1e-38
Glyma09g02900.2 59 1e-09
Glyma09g02900.1 59 1e-09
Glyma05g30310.1 51 3e-07
Glyma05g35880.1 49 9e-07
Glyma08g03740.1 48 3e-06
Glyma07g06570.1 47 5e-06
Glyma13g42500.1 46 8e-06
>Glyma07g11610.1
Length = 1214
Score = 154 bits (390), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 94/107 (87%)
Query: 1 EGKNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGS 60
EGKNLKLVDAPVSGGV RAS GTLTIMASG D+AL G VLAALSEKLY+IKGGCGAGS
Sbjct: 280 EGKNLKLVDAPVSGGVVRASMGTLTIMASGTDDALKSAGLVLAALSEKLYIIKGGCGAGS 339
Query: 61 GVKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSWF 107
GVKM+NQLLAGV IASAAEA+AF ARLGLNTR+LFDFI S GTSW
Sbjct: 340 GVKMINQLLAGVQIASAAEAIAFAARLGLNTRLLFDFIATSGGTSWM 386
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 45 LSEKLYVIKGGCGAGSGVKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGT 104
+ EKL+ +G G GS VKMV +L G+H +A EA++ GA++G++ I++D I N+ G
Sbjct: 1 MCEKLFTFEGEIGGGSKVKMVTVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGN 60
Query: 105 SW 106
SW
Sbjct: 61 SW 62
>Glyma09g02900.2
Length = 343
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 3 KNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGV 62
K KL DAPVSG V A GTLT M G +EA + +L ++ K + GG G+GS
Sbjct: 154 KPFKL-DAPVSGSVTAAEAGTLTFMVGGSEEAFLAAKPLLFSMG-KSAIYCGGAGSGSAA 211
Query: 63 KMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSW 106
K+ N L V + +EA+A G LG++ L + S W
Sbjct: 212 KICNNLALAVSMLGISEALALGQSLGVSASTLTNIFNCSSARCW 255
>Glyma09g02900.1
Length = 350
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 3 KNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGV 62
K KL DAPVSG V A GTLT M G +EA + +L ++ K + GG G+GS
Sbjct: 161 KPFKL-DAPVSGSVTAAEAGTLTFMVGGSEEAFLAAKPLLFSMG-KSAIYCGGAGSGSAA 218
Query: 63 KMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSW 106
K+ N L V + +EA+A G LG++ L + S W
Sbjct: 219 KICNNLALAVSMLGISEALALGQSLGVSASTLTNIFNCSSARCW 262
>Glyma05g30310.1
Length = 309
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVNQ 67
VDAPVSGG A DG L I+A+G+ + + + L Y+ GC G K+ NQ
Sbjct: 130 VDAPVSGGDIGARDGKLAILAAGEKAVVEWLSPLFSILGRATYMGPAGC--GQSCKIANQ 187
Query: 68 LLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
+ G ++ +E + F R GL+ R + I
Sbjct: 188 ITIGANLIGLSEGLVFAKRAGLDLREFVEAI 218
>Glyma05g35880.1
Length = 310
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVNQ 67
+DAPVSGG + A +GTL I A G++ + A+ + L + Y+ GG G G K+ NQ
Sbjct: 129 IDAPVSGGDRGAKNGTLAIFAGGEESTVKRMEALFSHLGKVNYM--GGSGKGQFAKLANQ 186
Query: 68 LLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
+ + E M + + GL+ + D I
Sbjct: 187 VTIASTMVGLVEGMVYAHKAGLDVGLYLDAI 217
>Glyma08g03740.1
Length = 336
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVNQ 67
+DAPVSGG + A +GTL I A G++ + + + L + Y+ GG G G K+ NQ
Sbjct: 156 IDAPVSGGDRGAKNGTLAIFAGGEEATVKRLEPLFSHLGKVKYM--GGSGKGQFAKLANQ 213
Query: 68 LLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
+ + E M + + GL+ + D I
Sbjct: 214 VTIASTMVGLVEGMVYAHKAGLDVGLYLDAI 244
>Glyma07g06570.1
Length = 290
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVN 66
++APVSG K A DG L I+A+GD L +K + + G G G+ +K+V
Sbjct: 114 FLEAPVSGSKKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFL-GEVGNGAKMKLVV 172
Query: 67 QLLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
++ G + + +E + R GLN L D +
Sbjct: 173 NMIMGSMMNAFSEGLTLAERSGLNPGTLLDVL 204
>Glyma13g42500.1
Length = 276
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSE-KLYVIKGGCGAGSGVKMV 65
++APVSG K A DG L + +GD G++L + + K Y+ G G G+ +K+V
Sbjct: 97 FLEAPVSGSKKPAEDGQLIFLTAGDKNLYEAVGSLLDIMGKSKFYL--GDVGNGAAMKLV 154
Query: 66 NQLLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
++ G +AS +E + ++GL+ +L +
Sbjct: 155 VNMIMGSMMASFSEGLLLSEKVGLDPDVLVQVV 187