Jatropha Genome Database

JcCB0104191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0104191.10 + phase: 0 /partial
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g03600.1                                                       256   6e-69
Glyma07g36960.1                                                       227   5e-60

>Glyma17g03600.1 
          Length = 229

 Score =  256 bits (655), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 1   QDYIFVREFVPFVASVLLKACKNSEDGNDMEVILGGLASLNDEIAWFKSEASKWDVSLSN 60
           QDY+FVR FVPFVASVL+KA K S+   DMEVILGG+ASL DEI+WFK+EA+KW +SLS+
Sbjct: 54  QDYLFVRAFVPFVASVLIKAWKESDCSGDMEVILGGMASLEDEISWFKTEANKWGISLSD 113

Query: 61  TVVHKANQTYCRFLESLMSREVEYALALTALWAIEATYQESFAHCLEDGSKTPPELQETC 120
            V  +AN+ YC  LESLMS + EY +A+TA WAIE  YQESFAHC+E+GSKTPPEL+ETC
Sbjct: 114 VVPQQANKNYCGLLESLMSPDAEYTVAITAFWAIETVYQESFAHCIEEGSKTPPELKETC 173

Query: 121 RRWGNEGFGEYCRSLKKIANRYLEKASADVIAKAEVTLLHVLEHEVEFWNMSHRG 175
            RWGNE FG+YC+SL+ IANR L+KAS + + KAEV LL VLEHEVEFWNMS RG
Sbjct: 174 VRWGNEAFGKYCQSLQNIANRCLQKASDEELKKAEVMLLSVLEHEVEFWNMS-RG 227


>Glyma07g36960.1 
          Length = 231

 Score =  227 bits (578), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/172 (64%), Positives = 131/172 (76%), Gaps = 11/172 (6%)

Query: 1   QDYIFVREFVPFVASVLLKACKNSEDGNDMEVILGGLASLNDEIAWFKSEASKWDVSLSN 60
           QDY+FVR FVPF ASVL+KA K S+   DMEVILGG+ASL DEI+WFK+EA+KW +SLS+
Sbjct: 67  QDYLFVRAFVPFAASVLIKAWKESDCRGDMEVILGGVASLEDEISWFKAEANKWGISLSD 126

Query: 61  TVVHKANQTYCRFLESLMSREVEYALALTALWAIEATYQESFAHCLEDGSKTPPELQETC 120
            V    N+ Y R LESLM+            WAIEA YQESFAHC+E+GSK PPEL+ETC
Sbjct: 127 VVPQPPNKNYYRLLESLMT-----------FWAIEAVYQESFAHCIEEGSKIPPELKETC 175

Query: 121 RRWGNEGFGEYCRSLKKIANRYLEKASADVIAKAEVTLLHVLEHEVEFWNMS 172
            RWGNE FG+YC+SL+ IANR L+KAS + + KAE  LL VLEHEVEFWNMS
Sbjct: 176 ARWGNEAFGKYCQSLQNIANRRLQKASDEELKKAEFMLLSVLEHEVEFWNMS 227