Jatropha Genome Database

JcCB0103991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103991.10 - phase: 0 
         (369 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04930.1                                                       128   1e-29
Glyma10g11470.1                                                        72   7e-13
Glyma16g22890.1                                                        56   8e-08
Glyma16g22900.1                                                        51   2e-06

>Glyma02g04930.1 
          Length = 379

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 178/377 (47%), Gaps = 66/377 (17%)

Query: 28  SELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREES 87
           SELP E+  +I +SL+N++D  RF +VC+S RSS+        S    +  PL +  E  
Sbjct: 8   SELPIELWPKIGKSLENHMDIVRFRSVCESCRSSMPPPLPNSPSFPMQIPHPLNHSIETL 67

Query: 88  LPGYTT-----IDLKTFYLLRHSP-SSESCLVKVSGVSSGQEPPSSAIVRYLKTR----- 136
           L   T       D      L   P SS+  L+KV    +        ++  +  R     
Sbjct: 68  LNQATVYVIEPTDANGASKLEPLPVSSKGWLIKVEESKNHNHNHPLTLLSPISDRKIVYP 127

Query: 137 -----PLELNLIDFSVSELHKHYFATMYELTGDDEFYSEDTVSKIVV------IGRKDEL 185
                P+  NL++F V EL K Y   +          S   VSK+V       IG +D +
Sbjct: 128 HGTNSPVLWNLLEFRVIELCKSYTTNI----------SSAAVSKVVFFPNSPWIGAQDSV 177

Query: 186 AAMAIYGLEVELAWIRLGDERWTAMNEQD--YDDIINYKGQFYAVQGGSGKLIKIDVSSS 243
           A      LE +L +++ GDE+WT ++ ++  YDD+I +KGQFY V    G +  ID SS 
Sbjct: 178 ACCIF--LEGKLGFMKHGDEKWTLVDNKNFFYDDVIVFKGQFY-VTDDRGTISWIDTSSL 234

Query: 244 KAMKVVVPNLLNGSCGCSSEKNLVESGGELLLLDRDMKGNKLR----------------- 286
           K ++   P      CG   +K+LVES G L ++DR  +    R                 
Sbjct: 235 KLVQFSPP-----LCGLGDKKHLVESCGSLYVVDRYYESETSRRRNYVGGREDRVAAVVC 289

Query: 287 --VYKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYVEKDGFEMF 344
             VYK +EE GKWV++K+LGDR  V+     +FSV A++L G  + NC+ + +     ++
Sbjct: 290 FKVYKLDEEWGKWVDVKNLGDRAFVLGN-SCSFSVSAKELTGY-QENCIYFTDIFDVRVY 347

Query: 345 NLDDGSYSVLHSTDFPP 361
           NLDD S   + S DF P
Sbjct: 348 NLDDRS---IVSIDFDP 361


>Glyma10g11470.1 
          Length = 368

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 165/388 (42%), Gaps = 74/388 (19%)

Query: 28  SELPQEILAQIAESLDNYLDYF-RFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREE 86
           SELP+++L +I++ L     Y  RF +VC S+RSS     F       S+ L   +    
Sbjct: 5   SELPKDLLHKISQLLLESPLYLLRFRSVCSSWRSSTPPSPFN-----PSISLTNTF---- 55

Query: 87  SLPGYTTIDLKTFYLLRHSPSSESCLVKVSGVSSGQEPPSSA------IVRY-LKTRPLE 139
           SL   T + L        +P     LVK+S      +P +S       + R+ +K     
Sbjct: 56  SLSHRTLLLLNPNSNPNPNPRPRPWLVKLS-----LDPHASTARLFHPLSRFPMKLPRFA 110

Query: 140 LNLIDFSVSELHKHYFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAMAIYGLEVELAW 199
           L+L      +L + +  T    T  D  Y E  V  + +  RKD  A + I+ +  +LA 
Sbjct: 111 LDLFTLPALDLGREFLLTNTRHT-RDSLYIEKLVF-LPLTHRKDRFALLTIH-VSGKLAL 167

Query: 200 IRLGDERWTAMNEQD--YDDIINYKGQFYAVQGGSGKLIKIDVSSSKAMKVVVPNLLNGS 257
            R G++ WT + +    YDD+  +KG  Y     +G+ +++       + +    +  G 
Sbjct: 168 FRSGEDGWTVIPDMPTPYDDVCVFKGNLYGADS-NGRTVRVR-PDDGGLTLAAEPVFGGD 225

Query: 258 CGCSSEKNLVESGGELLLLD-------------------RDMKGN------KLRVYKANE 292
                +K LVES G LLL+D                    D+ G       K  V++ +E
Sbjct: 226 -----KKFLVESEGALLLVDMYLSYYSCTQGLFHEDFDEEDVAGMGWERTVKFDVFRLDE 280

Query: 293 EEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYVEK--------DGFEMF 344
           E  KWVE+  LG+R + + +   AFS  A+DL    + NCV + +         +G  +F
Sbjct: 281 EGKKWVELTDLGERVLFLGD-DCAFSASAKDLNLG-RGNCVAFRDDGLGFNRVLNGMGVF 338

Query: 345 NLDDGSYSVLH-----STDFPPIFKWLG 367
            LDDG  S L      S  F P   W+G
Sbjct: 339 RLDDGKISPLSECAGFSELFCPPPDWVG 366


>Glyma16g22890.1 
          Length = 235

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 20/100 (20%)

Query: 137 PLELNLIDFSVSELHKHYFATMYELTGDDEFYSEDTVSKIVV------IGRKDELAAMAI 190
           P+  NL+DF V+EL K Y   +          S  TVSK+V       IG +D +A    
Sbjct: 110 PMLWNLLDFRVTELCKSYTPNI----------SSATVSKVVFFPNSPWIGAEDSVACCIF 159

Query: 191 YGLEVELAWIRLGDERWTAMNEQD--YDDIINYKGQFYAV 228
             LE +L +++ GDE+W  ++ ++  YDD+I +KGQFY  
Sbjct: 160 --LEGKLGFMKHGDEKWNLVDNENFFYDDVIVFKGQFYVT 197


>Glyma16g22900.1 
          Length = 361

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 277 DRDMKGNKLRVYKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYV 336
           DR+      +VYK +EE G WV++K LGDR  V+     +FSV A++L G  + NC+ ++
Sbjct: 210 DREAAVEYFKVYKLDEEWGTWVDVKHLGDRAFVLGNC-CSFSVSAKELMGY-QGNCIYFM 267

Query: 337 EKDGFEMFNLDDGSYSVLHSTDFPPI 362
           +     ++NLD   Y ++    F P+
Sbjct: 268 DIFDVHVYNLD---YCMVPYLFFMPV 290