Jatropha Genome Database

JcCB0103441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103441.10 - phase: 0 
         (274 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g17050.1                                                       364   e-101
Glyma17g17040.1                                                       349   2e-96
Glyma17g17050.3                                                       279   2e-75
Glyma17g17050.2                                                       209   4e-54
Glyma17g17050.4                                                       195   4e-50
Glyma19g36130.1                                                        84   1e-16

>Glyma17g17050.1 
          Length = 251

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/265 (67%), Positives = 210/265 (79%), Gaps = 19/265 (7%)

Query: 12  LRALSPSSFPFLKTPKFPSQYPSHPTVYSPKS--TNASTLTTAFNTTKSRLVLRASASDF 69
           L++L PS  P + +P     +P+ P  YSPKS  +   ++T   +    R+ +  S S++
Sbjct: 4   LQSLRPSFRPSIPSPN-SHTFPATPFNYSPKSIGSKGGSVTVRHSIVSPRVSV--SNSEY 60

Query: 70  GSYIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSK 129
            + I E+LGDVTIFTA GEPV   DLWDQ++GIAVVALLRHFGCPCCWELAS LKESK++
Sbjct: 61  STQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVALLRHFGCPCCWELASALKESKAR 120

Query: 130 FESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPAS 189
           F+SAGVKLIA+G+G PNKAR+LA+RLPFP+DCLYADPDRKAY VL LYYGFGRTFFNP+S
Sbjct: 121 FDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADPDRKAYHVLNLYYGFGRTFFNPSS 180

Query: 190 VLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFKGKQLLYA 249
           +              KVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVF+GKQLLYA
Sbjct: 181 I--------------KVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKQLLYA 226

Query: 250 RKDEGTGDHAPLDDVFNICCKVPIA 274
           RKDEGTGDHAPLDDVF++CCK P+A
Sbjct: 227 RKDEGTGDHAPLDDVFDVCCKAPVA 251


>Glyma17g17040.1 
          Length = 251

 Score =  349 bits (896), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/263 (65%), Positives = 201/263 (76%), Gaps = 15/263 (5%)

Query: 12  LRALSPSSFPFLKTPKFPSQYPSHPTVYSPKSTNASTLTTAFNTTKSRLVLRASASDFGS 71
           L++L PS  P +  P   S +P+ P  YSPK   +  ++     + +   +  S S++  
Sbjct: 4   LQSLPPSFRPSIPPPNSHS-FPATPFNYSPKLIASKGVSVTLRNSITSPRVSVSNSEYSP 62

Query: 72  YIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSKFE 131
            I E+LGDVTIFTAAGEPV   DLWDQN+G+AVVA+LRHFGC CCWE AS LKESK++F+
Sbjct: 63  QIAENLGDVTIFTAAGEPVRFSDLWDQNQGVAVVAMLRHFGCICCWEFASALKESKARFD 122

Query: 132 SAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPASVL 191
           SAG+KLIA+GVG PNKARILA+RLPFPMDCLYADPDRKAY+VL LY+G GRTF NPAS  
Sbjct: 123 SAGIKLIAVGVGTPNKARILAERLPFPMDCLYADPDRKAYNVLNLYFGLGRTFLNPAS-- 180

Query: 192 ICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFKGKQLLYARK 251
                       AKVFSR+DALQKA KNYTI ATPDD SGVLQQGGMFVF+GKQLLYARK
Sbjct: 181 ------------AKVFSRWDALQKAAKNYTIGATPDDISGVLQQGGMFVFRGKQLLYARK 228

Query: 252 DEGTGDHAPLDDVFNICCKVPIA 274
           DEGTGDHAPLDDVF++CCK P+A
Sbjct: 229 DEGTGDHAPLDDVFDVCCKAPVA 251


>Glyma17g17050.3 
          Length = 224

 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 140/222 (63%), Positives = 168/222 (75%), Gaps = 19/222 (8%)

Query: 12  LRALSPSSFPFLKTPKFPSQYPSHPTVYSPKS--TNASTLTTAFNTTKSRLVLRASASDF 69
           L++L PS  P + +P     +P+ P  YSPKS  +   ++T   +    R+ +  S S++
Sbjct: 4   LQSLRPSFRPSIPSPN-SHTFPATPFNYSPKSIGSKGGSVTVRHSIVSPRVSV--SNSEY 60

Query: 70  GSYIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSK 129
            + I E+LGDVTIFTA GEPV   DLWDQ++GIAVVALLRHFGCPCCWELAS LKESK++
Sbjct: 61  STQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVALLRHFGCPCCWELASALKESKAR 120

Query: 130 FESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPAS 189
           F+SAGVKLIA+G+G PNKAR+LA+RLPFP+DCLYADPDRKAY VL LYYGFGRTFFNP+S
Sbjct: 121 FDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADPDRKAYHVLNLYYGFGRTFFNPSS 180

Query: 190 VLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSG 231
           +              KVFSRFDALQKAVKNYTIEATPDDRSG
Sbjct: 181 I--------------KVFSRFDALQKAVKNYTIEATPDDRSG 208


>Glyma17g17050.2 
          Length = 197

 Score =  209 bits (531), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 113/146 (77%), Gaps = 16/146 (10%)

Query: 131 ESAGVKLIAIGVGAPNKARILADR--LPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPA 188
           E+ G   I    G P +   L D+  LPFP+DCLYADPDRKAY VL LYYGFGRTFFNP+
Sbjct: 66  ENLGDVTIFTATGEPVRFSDLWDQSQLPFPLDCLYADPDRKAYHVLNLYYGFGRTFFNPS 125

Query: 189 SVLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFKGKQLLY 248
           S+              KVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVF+GKQLLY
Sbjct: 126 SI--------------KVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKQLLY 171

Query: 249 ARKDEGTGDHAPLDDVFNICCKVPIA 274
           ARKDEGTGDHAPLDDVF++CCK P+A
Sbjct: 172 ARKDEGTGDHAPLDDVFDVCCKAPVA 197



 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 5/91 (5%)

Query: 12  LRALSPSSFPFLKTPKFPSQYPSHPTVYSPKS--TNASTLTTAFNTTKSRLVLRASASDF 69
           L++L PS  P + +P     +P+ P  YSPKS  +   ++T   +    R+ +  S S++
Sbjct: 4   LQSLRPSFRPSIPSPN-SHTFPATPFNYSPKSIGSKGGSVTVRHSIVSPRVSV--SNSEY 60

Query: 70  GSYIGESLGDVTIFTAAGEPVMIKDLWDQNE 100
            + I E+LGDVTIFTA GEPV   DLWDQ++
Sbjct: 61  STQIAENLGDVTIFTATGEPVRFSDLWDQSQ 91


>Glyma17g17050.4 
          Length = 189

 Score =  195 bits (496), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 122/160 (76%), Gaps = 5/160 (3%)

Query: 12  LRALSPSSFPFLKTPKFPSQYPSHPTVYSPKS--TNASTLTTAFNTTKSRLVLRASASDF 69
           L++L PS  P + +P     +P+ P  YSPKS  +   ++T   +    R+ +  S S++
Sbjct: 4   LQSLRPSFRPSIPSPN-SHTFPATPFNYSPKSIGSKGGSVTVRHSIVSPRVSV--SNSEY 60

Query: 70  GSYIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSK 129
            + I E+LGDVTIFTA GEPV   DLWDQ++GIAVVALLRHFGCPCCWELAS LKESK++
Sbjct: 61  STQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVVALLRHFGCPCCWELASALKESKAR 120

Query: 130 FESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRK 169
           F+SAGVKLIA+G+G PNKAR+LA+RLPFP+DCLYADPDRK
Sbjct: 121 FDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYADPDRK 160


>Glyma19g36130.1 
          Length = 256

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 35/249 (14%)

Query: 35  HPT--------VYSPKSTNASTLTTAFNTTKSRLVLRASASDFGSYIGE----SLGDVTI 82
           HPT        +YS      ST+     TT     + ASA      +GE    SL  V +
Sbjct: 28  HPTLSLNQNLPIYSNNLLKLSTIQYHATTTP---FVAASAGVESPVLGEDTTSSLDSVKV 84

Query: 83  FTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSKFESAGVKLIAIGV 142
           F   G  + I DLW   +  AVVA  RHFGC  C + A  L   K   +++GV L+ IG 
Sbjct: 85  FDLNGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADYLSSKKDIMDASGVALVLIGP 142

Query: 143 GAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPASVLICTWHATTCLE 202
           G+ ++A+  A++  F  + +YADP   +Y+ L    G   TF   A + I   +     +
Sbjct: 143 GSIDQAKSFAEKSKFEGE-IYADPTHSSYEALNFVSGVLTTFTPNAGLKIIQLYMEGYRQ 201

Query: 203 QAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFK-GK-QLLYARKDEGTGDHAP 260
             K+    D + +               G  +QGG+ V   GK  + Y  +D+  GD   
Sbjct: 202 DWKLSFEKDTVSR---------------GGWKQGGIIVAGPGKNNISYLHRDKEAGDDPE 246

Query: 261 LDDVFNICC 269
           ++D+   CC
Sbjct: 247 IEDILKACC 255