Jatropha Genome Database

JcCB0103411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103411.10 + phase: 0 /partial
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g07250.1                                                       631   0.0  
Glyma16g26210.1                                                       630   0.0  
Glyma17g35800.1                                                       120   2e-27
Glyma14g09380.1                                                       119   3e-27
Glyma04g16260.1                                                        82   6e-16
Glyma04g16260.2                                                        82   9e-16
Glyma06g47430.1                                                        82   1e-15
Glyma19g27330.1                                                        77   3e-14

>Glyma02g07250.1 
          Length = 489

 Score =  631 bits (1628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/323 (91%), Positives = 311/323 (96%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
           MIAIPYLTALTTYFSYGLLFAFGQ RDFFRKI DW S+NNLQGYAPICLGLEDFYIRRLY
Sbjct: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSANNLQGYAPICLGLEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
           LRIQDCFGRPIASAPDAWFDVVER+SNDNNKTL RT  + RCLNLGSYNYLGFAAADEYC
Sbjct: 61  LRIQDCFGRPIASAPDAWFDVVERHSNDNNKTLKRTDKISRCLNLGSYNYLGFAAADEYC 120

Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
           TPRV+++LKKYSPSTCS+RVD GTT LH ELE+CVA+FVGKPAAIVFGMGYVTNSAILPV
Sbjct: 121 TPRVVDTLKKYSPSTCSTRVDGGTTVLHLELEECVANFVGKPAAIVFGMGYVTNSAILPV 180

Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
           L+GKG LIISDSLNHNSIVNGARGSGATIRVFQHN PSHLEEVLREQIA+GQPRTHRPWK
Sbjct: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNEPSHLEEVLREQIAEGQPRTHRPWK 240

Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
           KI+V+VEGIYSMEGELCKLPE+IA+CKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA
Sbjct: 241 KIMVVVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300

Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
           DVDIMMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAGS 323


>Glyma16g26210.1 
          Length = 490

 Score =  630 bits (1626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/323 (91%), Positives = 310/323 (95%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
           MIAIPYLTALTTYFSYGLLFAFGQ RDFFRKI DW S+N LQGYAPICLGLEDFYIRRLY
Sbjct: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSANTLQGYAPICLGLEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
           LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTL RT  + RCLNLGSYNYLGFAAADEYC
Sbjct: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKISRCLNLGSYNYLGFAAADEYC 120

Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
           TPRV+++LKKYSPSTCS+RVD GTTALH ELE+CVA FVGKPAAIVFGMGYVTNSAILPV
Sbjct: 121 TPRVVDTLKKYSPSTCSTRVDGGTTALHLELEECVAKFVGKPAAIVFGMGYVTNSAILPV 180

Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
           L+GKG LIISDSLNHNSIVNGARGSGATIRVFQHN PSHLEEVLREQIA+GQPRTHRPWK
Sbjct: 181 LMGKGNLIISDSLNHNSIVNGARGSGATIRVFQHNEPSHLEEVLREQIAEGQPRTHRPWK 240

Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
           KI+VIVEGIYSMEGELCKLPE+IA+CKKYKAYTYLDEAHSIGAVGK+GRGVCELLGVDTA
Sbjct: 241 KIMVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
           DVDIMMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAGS 323


>Glyma17g35800.1 
          Length = 483

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 12/230 (5%)

Query: 98  NVKRCLNLGSYNYLGFAAADEYCTPRVIES----LKKYSPSTCSSRVDAGTTALHNELEK 153
           N K  +N  S NYLGF        P++++S    L KY   +C  R   GT  +H + E 
Sbjct: 107 NGKEVVNFASANYLGFIG-----HPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEA 161

Query: 154 CVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQ 213
            +A F+G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+
Sbjct: 162 RIAKFLGTPESILYSYGLSTMFSAIPAFSKKGDVIVADEGVHWGIQNGLYLSRSTVVYFK 221

Query: 214 HNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYT 273
           HN    L E L    A  + +  +  ++ IVI E +Y   GE+  L EII + +KY+   
Sbjct: 222 HNDMDSLRETLENITA--KYKKAKNLRRYIVI-EAVYQNSGEIAPLDEIIKLKEKYRFRV 278

Query: 274 YLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
            LDE++S+G +G SGRG+ E  GV    +DI+  +   +  + GG+  GS
Sbjct: 279 LLDESNSLGVLGSSGRGLTEYCGVPVEKIDIITASMGHALATEGGFCTGS 328


>Glyma14g09380.1 
          Length = 483

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 12/230 (5%)

Query: 98  NVKRCLNLGSYNYLGFAAADEYCTPRVIES----LKKYSPSTCSSRVDAGTTALHNELEK 153
           N K  +N  S NYLGF        P++++S    L KY   +C  R   GT  +H + E 
Sbjct: 107 NGKEVVNFASANYLGFIG-----HPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEA 161

Query: 154 CVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQ 213
            +A F+G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+
Sbjct: 162 RIAKFLGTPESILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFK 221

Query: 214 HNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYT 273
           HN    L E L E I     +T    + I+V  E +Y   G++  L EII + +KY+   
Sbjct: 222 HNDMDALRETL-ENITSKYKKTKNLRRYIVV--EAVYQNSGQIAPLDEIIKLKEKYRFRV 278

Query: 274 YLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
            LDE++S+G +G SGRG+ E  GV    +DI+      +  + GG+  GS
Sbjct: 279 LLDESNSLGVLGSSGRGLTEHCGVPVEKIDIITAAMGHALATEGGFCTGS 328


>Glyma04g16260.1 
          Length = 477

 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 38/239 (15%)

Query: 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKP 162
           L L S+  +G AAA         ++ +++      S +  G T  H  LE  +AD   K 
Sbjct: 115 LGLSSHPTIGKAAA---------KAAQEHGMGPRGSALICGYTNYHRLLESSLADLKKKE 165

Query: 163 AAIVFGMGYVTNSAILPVLIGKGGL--------------IISDSLNHNSIVNG----ARG 204
             ++   G+  N A++  +   G L              + SD+LNH SI++G     R 
Sbjct: 166 DCLLCPTGFAANMALMTAIGSIGTLLAGNRIPSEDEKIAVFSDALNHASIIDGIRLAERQ 225

Query: 205 SGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIA 264
               + V++H   SHL  +L          ++   +K +V+ + ++SM+G+   + E+  
Sbjct: 226 KSVKVYVYRHCDVSHLNMLL----------SNCRMRKKVVVTDSLFSMDGDYAPMVELAD 275

Query: 265 ICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
           + KK+     +D+AH     GK+G GV E    +  DVDI +GT +K+ G  GG+IA S
Sbjct: 276 LRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCEK-DVDICIGTLSKAAGCHGGFIACS 333


>Glyma04g16260.2 
          Length = 363

 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 38/239 (15%)

Query: 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKP 162
           L L S+  +G AAA         ++ +++      S +  G T  H  LE  +AD   K 
Sbjct: 115 LGLSSHPTIGKAAA---------KAAQEHGMGPRGSALICGYTNYHRLLESSLADLKKKE 165

Query: 163 AAIVFGMGYVTNSAILPVLIGKGGL--------------IISDSLNHNSIVNG----ARG 204
             ++   G+  N A++  +   G L              + SD+LNH SI++G     R 
Sbjct: 166 DCLLCPTGFAANMALMTAIGSIGTLLAGNRIPSEDEKIAVFSDALNHASIIDGIRLAERQ 225

Query: 205 SGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIA 264
               + V++H   SHL  +L          ++   +K +V+ + ++SM+G+   + E+  
Sbjct: 226 KSVKVYVYRHCDVSHLNMLL----------SNCRMRKKVVVTDSLFSMDGDYAPMVELAD 275

Query: 265 ICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
           + KK+     +D+AH     GK+G GV E    +  DVDI +GT +K+ G  GG+IA S
Sbjct: 276 LRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCEK-DVDICIGTLSKAAGCHGGFIACS 333


>Glyma06g47430.1 
          Length = 477

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 30/275 (10%)

Query: 67  FGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYCTPRVIE 126
           F R +   P +  ++V   +  + +        K+ +     +YLG ++        V +
Sbjct: 71  FSRWMHDTPSSGDEIVCSATGGDGEAGASYEKFKKLILFSGNDYLGLSS-HPTIGKAVAK 129

Query: 127 SLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGG 186
           + +++      S +  G T  H  LE  +AD   K   ++   G+  N A++  +   G 
Sbjct: 130 AAQEHGMGPRGSALICGYTNYHRLLESSLADLKKKEDCLLCPTGFAANMALMTAIGSIGT 189

Query: 187 L--------------IISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLEEVLREQI 228
           L              + SD+LNH SI++G     R     + V++H   SHL  +L    
Sbjct: 190 LLAGNSIPSEDEKIAVFSDALNHASIIDGIRLTERQKSVKVYVYRHCDMSHLNMLL---- 245

Query: 229 ADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSG 288
                 ++   +K +V+ + ++SM+G+   + E+  + K++     +D+AH     GK+G
Sbjct: 246 ------SNCRMRKKVVVTDSLFSMDGDYAPMVELADLRKRHGFLLVIDDAHGTFVCGKNG 299

Query: 289 RGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
            GV E    +  DVDI +GT +K+ G  GG+IA S
Sbjct: 300 GGVAEEFNCEK-DVDICIGTLSKAAGCHGGFIACS 333


>Glyma19g27330.1 
          Length = 72

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 8/72 (11%)

Query: 1  MIAIPYLTALTTYFSYGLLFAFGQIRDF----FRKIID----WWSSNNLQGYAPICLGLE 52
          MI I YLTALTTYF+YGLLF+F Q R+F    F  II+    +   + +QGYA + LGLE
Sbjct: 1  MITISYLTALTTYFNYGLLFSFNQFREFFFLLFHSIINTNILFSFPSTIQGYALVYLGLE 60

Query: 53 DFYIRRLYLRIQ 64
          DFYI R+YL IQ
Sbjct: 61 DFYIYRMYLSIQ 72