Jatropha Genome Database
- JcCB0102141.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0102141.10 - phase: 0 /partial
(158 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g02470.1 85 3e-17
Glyma12g02470.2 85 3e-17
Glyma11g10150.2 81 6e-16
Glyma11g10150.1 81 6e-16
Glyma19g36020.1 49 2e-06
Glyma03g33300.1 47 6e-06
>Glyma12g02470.1
Length = 1649
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 1 MEFIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLLE-RKEAV 59
MEF+G+ V KE KG G SG V+SYDPSSGFFEIVYEDGDSEEL+ SEV SLL+ + E+V
Sbjct: 1 MEFVGKTVRKEVKGVGFISGTVKSYDPSSGFFEIVYEDGDSEELESSEVASLLQFQPESV 60
Query: 60 PVDXXXXXXXXXXXXXXXXXXXXXNQGQSGNSISRSQPIEETLGRPSVVEANVNF--DMN 117
Q ++ SRS + E L VE +F D++
Sbjct: 61 KAKPRVGRKPKKRRRVE----------QKPDAGSRSGNVSENL-----VEDGSDFRGDLD 105
Query: 118 RNVDLNDGFTGDLGEGEIAN------GNLRNMNVDLNEALEKGGG 156
NV G DLG I GN N V++N ++++ GG
Sbjct: 106 GNVSSAGGGDLDLGCAGIDRAIDVDVGNGGNSIVNVNGSVKENGG 150
>Glyma12g02470.2
Length = 1633
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 1 MEFIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLLE-RKEAV 59
MEF+G+ V KE KG G SG V+SYDPSSGFFEIVYEDGDSEEL+ SEV SLL+ + E+V
Sbjct: 1 MEFVGKTVRKEVKGVGFISGTVKSYDPSSGFFEIVYEDGDSEELESSEVASLLQFQPESV 60
Query: 60 PVDXXXXXXXXXXXXXXXXXXXXXNQGQSGNSISRSQPIEETLGRPSVVEANVNF--DMN 117
Q ++ SRS + E L VE +F D++
Sbjct: 61 KAKPRVGRKPKKRRRVE----------QKPDAGSRSGNVSENL-----VEDGSDFRGDLD 105
Query: 118 RNVDLNDGFTGDLGEGEIAN------GNLRNMNVDLNEALEKGGG 156
NV G DLG I GN N V++N ++++ GG
Sbjct: 106 GNVSSAGGGDLDLGCAGIDRAIDVDVGNGGNSIVNVNGSVKENGG 150
>Glyma11g10150.2
Length = 1605
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 1 MEFIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLLE 54
MEF+G+ V KE KG G +G V+SYDPSSGFFEIVY+DGDSEEL+ S+V SLL+
Sbjct: 1 MEFVGKTVRKEVKGVGFITGTVKSYDPSSGFFEIVYDDGDSEELESSQVASLLQ 54
>Glyma11g10150.1
Length = 1605
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 1 MEFIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLLE 54
MEF+G+ V KE KG G +G V+SYDPSSGFFEIVY+DGDSEEL+ S+V SLL+
Sbjct: 1 MEFVGKTVRKEVKGVGFITGTVKSYDPSSGFFEIVYDDGDSEELESSQVASLLQ 54
>Glyma19g36020.1
Length = 161
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 3 FIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLL 53
F GR V K F G YSG V +D SG++ + YEDGDSE+LD+ E+ +L
Sbjct: 64 FEGREVQKWFMGR-YYSGAVTDFDKGSGWYRVHYEDGDSEDLDWPELEEVL 113
>Glyma03g33300.1
Length = 159
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 FIGRIVDKEFKGYGVYSGVVQSYDPSSGFFEIVYEDGDSEELDFSEVVSLL 53
F GR V K F G +SG+V +D SG++ + YEDGDSE+LD+ E+ +L
Sbjct: 62 FEGRDVQKWFMGR-YFSGMVTDFDKDSGWYRVHYEDGDSEDLDWQELEEVL 111