Jatropha Genome Database

JcCB0100231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0100231.10 - phase: 1 /partial
         (489 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42440.1                                                       248   8e-66
Glyma08g15870.1                                                       239   4e-63
Glyma13g31800.1                                                        83   8e-16
Glyma15g07500.1                                                        82   1e-15
Glyma13g25380.1                                                        53   9e-07

>Glyma15g42440.1 
          Length = 655

 Score =  248 bits (634), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 204/502 (40%), Positives = 262/502 (52%), Gaps = 92/502 (18%)

Query: 28  SAGDESDRENRSVNEXXXXXXXXXXXXXXXXXLEAEPVRDVPGETAPVLSGS-------- 79
           + GDESDREN+SVNE                     P        APV +GS        
Sbjct: 206 TMGDESDRENQSVNESNSTGSRFEKTGDGDAKAGTGP--------APVQTGSIEPDPVLR 257

Query: 80  NSKPVRGGEESHE-----LGDSATQLSSEVQSSASLGSXXXXXXXXXXEDVGG-----DG 129
             KPV  GEES+      L    T+ SSEVQSSASL               GG     + 
Sbjct: 258 KGKPV--GEESNNGSYDALAKGGTRESSEVQSSASLTRKRKTRRRKEVSGGGGASSPAEN 315

Query: 130 IKGATVKSEPLVTLMEIIRSNRHGSFFEGRLESQETEVYKNLVRQHLDLETIQTRLEQGS 189
            + ATVKSEPLV ++E+I+ + H S FE RLESQ+T+ YK+LV+Q +DLETIQ RL++G 
Sbjct: 316 DELATVKSEPLVGVLELIKGHEHSSLFERRLESQDTDRYKDLVKQPMDLETIQLRLQKGH 375

Query: 190 YASSNLSFYRDLLLLFNNAIVFFPKTSNESHAAYELRSLVTNEMKKETQ-KSDSTVAPLD 248
           Y+S   +F+RDLLLLF NA VFF   + ES    +L  L T EMK   Q +SD      D
Sbjct: 376 YSSCTSAFFRDLLLLFTNATVFFSHDTLESQVGRQLHRLATTEMKNHGQAQSDPIPRKND 435

Query: 249 IPPQPKSEPERSDSLLAKHKASAPIVVCRKRSSLSAKPSPLSFVQKIEHQQQSSDNEPVS 308
             P P +   + DSL++K+KAS PI+VCRKRSS+ AKPS  +F QK E +          
Sbjct: 436 SLP-PNASLAKPDSLISKNKASGPILVCRKRSSMLAKPSSATFGQKDEEELP-------- 486

Query: 309 DLKPLAVEQSSLKIESKEKPVTGTRSSRRSNKNLVKSTNTPSKKPNVSPVTKVSTADKPE 368
                         ++KEKPVTG RS RRS KNL  + N                     
Sbjct: 487 --------------KAKEKPVTGARSLRRSYKNLNNNNN--------------KKPSSNS 518

Query: 369 TPKIDKKKAEPSSLDKKR-SAVDFLKRIKKNSPVEVSKKNTRGAANGAG------ERKRD 421
           TPK  K +  P   DKKR +A DFLKRIK+N+  E SK  + G+  G        ++K  
Sbjct: 519 TPKTGKAEGGP---DKKRNAAADFLKRIKRNTSAEASKGGSGGSGGGGSGGGGGKQKKMV 575

Query: 422 SPGKGEKGKERVSRRNG-----------DDKQMEESSPSKKNLGRPTKKGAEASKVSGKH 470
           + GKG+KGKER SR N            + K +E +S SK+++GRP KK AE +  S K 
Sbjct: 576 NNGKGDKGKERASRHNNVGGGSGSGDKRNSKNVENNSQSKRSVGRPPKKAAETNAGSAKR 635

Query: 471 GRD---SGGKEVAKRPKKRSRR 489
           GR+   S GK+  KRPKKRS++
Sbjct: 636 GRESSASAGKD--KRPKKRSKK 655


>Glyma08g15870.1 
          Length = 689

 Score =  239 bits (611), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 218/525 (41%), Positives = 284/525 (54%), Gaps = 74/525 (14%)

Query: 28  SAGDESDRENRSVNEXXXXXXXXXXXXXXXXXLEAEPVRDVPGETAPVLSGSNSKPVRGG 87
           + GDESDREN+SVNE                     P    P  T   +  S  + V   
Sbjct: 176 TTGDESDRENQSVNESNSTGSRFEKTGDGDAKTGTGPD---PVPTCESVPPSEGRKVEED 232

Query: 88  EESHELGDS-------ATQLSSEVQSSASLGSXXXXXXXXXXEDVGG--------DGIKG 132
           ++S EL DS        T+ SSEVQSSASL            ++V G        +  + 
Sbjct: 233 DDSSELHDSVAHSGEGGTRESSEVQSSASL---MRKRKTRRRKEVSGATDASCPAENDEA 289

Query: 133 ATVKSEPLVTLMEIIRSNRHGSFFEGRLESQE-TEVYKNLVRQHLDLETIQTRLEQGSYA 191
           ATVKSEPLV ++E+I+ + H S FE RL+SQ+ T+ YK+LV+Q +DLETIQ RL++G Y+
Sbjct: 290 ATVKSEPLVGVLELIKGHEHSSLFERRLDSQQDTDRYKDLVKQPMDLETIQLRLQKGHYS 349

Query: 192 SSNLSFYRDLLLLFNNAIVFFPKTSNESHAAYELRSLVTNEMKKETQ-KSDSTVAPLD-I 249
           S   +F+RDLLLLF NA VFF   S ES A  +L  L T EMK   Q +SD      D +
Sbjct: 350 SCTSAFFRDLLLLFTNATVFFSHDSLESQAGRQLHRLATAEMKNHGQAQSDPIPRKNDSL 409

Query: 250 PPQ-PKSEPERSDSLLAKHKASAPIVVCRKRSSLSAKPSPLSFVQKIEHQQQSSDNE-PV 307
           PP  P ++P   DSLL+K+KAS PI+VCRKRSS+S+KPS  +F QK +    +   E P 
Sbjct: 410 PPNAPLAKP---DSLLSKNKASGPILVCRKRSSMSSKPSSATFGQKGDQPVFNDKKERPS 466

Query: 308 SDLKPLAVEQSSLKIE-----SKEKPVTGTRSSRR--SNKNLVKSTNTPSKKPNVSPVTK 360
           SD KP     SS   E     +KEKPVTG RS RR   N N   S N   K  ++S    
Sbjct: 467 SDAKPPMKPSSSDTDEEELPKAKEKPVTGARSLRRSNKNLNSNSSNNNNKKPSSISTPKA 526

Query: 361 VSTADKP-ETPKIDKKKAEPSSLDKKRSAVDFLKRIKKNSPVEV---------------- 403
            S+ +KP ET K +K KAE  +  K+ +A DFLKRIK+N+  E                 
Sbjct: 527 GSSGNKPSETVKPEKSKAEGGADKKRSAAADFLKRIKRNTSAEASKGGSGGGSGGGGGGG 586

Query: 404 ----SKKNTRGAANGAGERKRD-SPGKGEKGKERVSRRNG-----------DDKQMEESS 447
               S     G  NGA E+K+  + GKG+KGKER SR N            ++K +E SS
Sbjct: 587 GGSSSSSKGGGGGNGAKEQKKMVNNGKGDKGKERASRHNNVGGGSGSADKRNNKNIENSS 646

Query: 448 PSKKNLGRPTKKGAEASKVSGKHGRD---SGGKEVAKRPKKRSRR 489
            SK+++GRP KK AE +  S K GR+   S GK+  KRPKKRS++
Sbjct: 647 QSKRSVGRPPKKAAETNAGSAKRGRENSASAGKD--KRPKKRSKK 689


>Glyma13g31800.1 
          Length = 455

 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 138 EPLVTLMEIIRSNRHGSFFEGRLESQETEVYKNLVRQHLDLETIQTRLEQGSYASSNLSF 197
           E ++ +++ I   +    F  RL+SQ+   YK ++RQH+D +TI++R+   +  SS +  
Sbjct: 261 EDMMEILDFIFETKGAPAFRRRLDSQKRGRYKKMIRQHMDFDTIRSRISSQTIKSS-VEL 319

Query: 198 YRDLLLLFNNAIVFFPKTSNESHAAYELRSLVTNEMKKETQKSDSTVAPLDIP 250
           +RDLLLL NNA+VF+ K++ E      LR +VT +M KET K  +T  P+ +P
Sbjct: 320 FRDLLLLTNNALVFYSKSTREYKTVLLLRGIVTKKM-KETLK--ATNVPIKLP 369


>Glyma15g07500.1 
          Length = 460

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 132 GATVKSEPLVTLMEIIRSNRHGSFFEGRLESQETEVYKNLVRQHLDLETIQTRLEQGSYA 191
           G   KS  ++ +++ I   +  S F+ RL+SQ+   YK ++ QH+D +TI++R+   +  
Sbjct: 250 GEVAKSCDMMEILDFIFETKGASAFQRRLDSQKRGRYKKMILQHMDFDTIRSRISSQTIK 309

Query: 192 SSNLSFYRDLLLLFNNAIVFFPKTSNESHAAYELRSLVTNEMK 234
           SS +  +RDLLLL NNA+VF+ K++ E   A  LR +VT +M+
Sbjct: 310 SS-VELFRDLLLLTNNALVFYSKSTREYKTALLLRGIVTKKMR 351


>Glyma13g25380.1 
          Length = 495

 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 133 ATVKSEPLVTLMEIIRSN---RHGSFFEGRLESQETEVYKNLVRQHLDLETIQTRLEQGS 189
           A +K+  +  LME++ S    +  S F  + ++Q+   Y+ L+RQH+D +TI++R+  G+
Sbjct: 259 ANLKTAGIKDLMELLDSFLVVQGASVFTYKHDNQKQGRYEKLIRQHVDFDTIKSRIHNGT 318

Query: 190 YASSNLSFYRDLLLLFNNAIVFFPKTSNESHAAYELRSLVTNEMKKETQKSDST 243
             S  +   RDLLLL NNA+VF+ K + E     +LR LV   + ++ + S ++
Sbjct: 319 IKSV-VELLRDLLLLSNNALVFYSKNTREHKTGLQLRDLVIKTLTEKLESSSTS 371