Jatropha Genome Database

JcCB0099601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099601.10 - phase: 0 /partial
         (51 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07960.1                                                        81   3e-16
Glyma13g39210.1                                                        80   4e-16
Glyma12g31100.2                                                        80   7e-16
Glyma12g31100.1                                                        80   7e-16

>Glyma08g07960.1 
          Length = 299

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/44 (88%), Positives = 40/44 (90%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          EKGR VVVSALQFACTDDI+TNV TAERLVRAAH  GANIILIQ
Sbjct: 2  EKGRTVVVSALQFACTDDISTNVATAERLVRAAHKQGANIILIQ 45


>Glyma13g39210.1 
          Length = 299

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 40/44 (90%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          EKGR VVVSALQFACTDD++TNV TAERLVRAAH  GANIILIQ
Sbjct: 2  EKGRTVVVSALQFACTDDVSTNVATAERLVRAAHKQGANIILIQ 45


>Glyma12g31100.2 
          Length = 299

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/44 (81%), Positives = 40/44 (90%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          EKGR VVVSALQFACTDD++TN+ TAERL+RAAH  GANIILIQ
Sbjct: 2  EKGRTVVVSALQFACTDDVSTNIATAERLIRAAHKQGANIILIQ 45


>Glyma12g31100.1 
          Length = 299

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/44 (81%), Positives = 40/44 (90%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          EKGR VVVSALQFACTDD++TN+ TAERL+RAAH  GANIILIQ
Sbjct: 2  EKGRTVVVSALQFACTDDVSTNIATAERLIRAAHKQGANIILIQ 45