Jatropha Genome Database

JcCB0096311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0096311.10 + phase: 0 
         (301 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g12450.1                                                       291   7e-79
Glyma14g24930.1                                                       263   1e-70
Glyma13g09480.1                                                       244   6e-65
Glyma13g23910.1                                                        74   1e-13
Glyma19g01310.1                                                        69   6e-12
Glyma18g14500.1                                                        57   3e-08
Glyma18g52260.1                                                        55   8e-08
Glyma02g10600.1                                                        54   3e-07
Glyma04g00320.1                                                        52   1e-06
Glyma09g06730.1                                                        48   1e-05

>Glyma06g12450.1 
          Length = 405

 Score =  291 bits (744), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 195/280 (69%), Gaps = 11/280 (3%)

Query: 18  FCTCRHCGGKADGRDCLVCDSCEEMYHVSCIQPAVKEI-PLKSWYCASCTAVGMGSPHEN 76
           FC C  CG KAD  DCLVCDSCEE+YHVSCI+PAVKEI P KSWYCA+CTA  + S HEN
Sbjct: 123 FCKC--CGEKADDTDCLVCDSCEEIYHVSCIEPAVKEIIPHKSWYCANCTANVIESLHEN 180

Query: 77  CVVCKRLNAPRALCNDTDDEMKYATIERTFSKFEETSNCSRDDFRQPPVGNKSSCVCKIC 136
           CV+C+RLN  + L +D   +  + TIE T ++FEE SNC+ D   Q  +G + +  CKIC
Sbjct: 181 CVLCERLNDAKTL-DDVIGDGSFPTIEETQNEFEENSNCTSDGI-QVSIGEEKTPNCKIC 238

Query: 137 GSEVENGEKVKICEHNGCPYKYYHVRCLTTNLLKSYGPRWYCSSCLCRVCLLDRDDHQIV 196
            +EV+ G K+KIC H  C  KYYHVRCLT N LKSYG  WYC SCLCRVCL D+DD +IV
Sbjct: 239 ENEVDGG-KIKICGHRFCSNKYYHVRCLTINQLKSYGHCWYCPSCLCRVCLTDQDDDRIV 297

Query: 197 LCDGCDHAFHLYCLNPPRTSVPRGKWFCRQCDVKIKEIRRVKKAYEKQGNRMKRKDEMGR 256
           LCDGCDHA+H+YC+ PPRTS+PRG WFCR+CD  I+ I + KKAYE   N+ +R  E   
Sbjct: 298 LCDGCDHAYHIYCMKPPRTSIPRGNWFCRKCDAGIQAIHQAKKAYE--FNKPRRNGEDAA 355

Query: 257 SACENLGKKLDVNCDQESDKDREPMEMLVKAA--LNFEEK 294
               NL KK +    +E +     M+ML+ AA  LNFEEK
Sbjct: 356 KPNANLEKKHNNKRARELESGG-AMDMLLTAANTLNFEEK 394


>Glyma14g24930.1 
          Length = 296

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 142/275 (51%), Positives = 188/275 (68%), Gaps = 8/275 (2%)

Query: 7   PESYFHGKLEQFCTCRHCGGKADGRDCLVCDSCEEMYHVSCIQPAVKEIPLKSWYCASCT 66
           PE        +  TC HCG KADG DCLVCDSCEEMYH+SCI+PAVKEIP KSW+CA+CT
Sbjct: 3   PEQTVECVAFRLGTCWHCGDKADGTDCLVCDSCEEMYHLSCIEPAVKEIPYKSWFCANCT 62

Query: 67  AVGMGSPHENCVVCKRLNAPRALCNDTDDEMKYATIERTFSKFEETSNCSRDDFRQPPVG 126
           A G+G  H+NCVVC+RLNA + L +D   E    T E T ++ EE SNC+ D   Q    
Sbjct: 63  ANGIGCRHKNCVVCERLNALKTL-DDIVGEENIPTNEETLNELEENSNCTYDGI-QISTD 120

Query: 127 NKSSCVCKICGSEVENGEKVKICEHNGCPYKYYHVRCLTTNLLKSYGPRWYCSSCLCRVC 186
            ++S  CKIC   V+ GEKVKIC H+ CP KYYHV CL++  LKSYG  WYC SC+C+VC
Sbjct: 121 RRNSSDCKICKMAVD-GEKVKICGHSFCPSKYYHVSCLSSKQLKSYGHCWYCPSCICQVC 179

Query: 187 LLDRDDHQIVLCDGCDHAFHLYCLNPPRTSVPRGKWFCRQCDVKIKEIRRVKKAYEKQGN 246
           L D+DD++IVLCD CDHA+H+YC+ PP+ S+P+GKWFC +C+  I+ IR+ +KAYE    
Sbjct: 180 LTDKDDNKIVLCDACDHAYHVYCMKPPQNSIPKGKWFCIKCEAGIQAIRQARKAYESNKG 239

Query: 247 RMKRKD-----EMGRSACENLGKKLDVNCDQESDK 276
           ++ + D     ++ +   +  G++LD  C  ++ K
Sbjct: 240 KVGQNDSKPNEDIDKKWNKKRGRELDNFCIDKNTK 274


>Glyma13g09480.1 
          Length = 262

 Score =  244 bits (624), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 134/259 (51%), Positives = 179/259 (69%), Gaps = 8/259 (3%)

Query: 42  MYHVSCIQPAVKEIPLKSWYCASCTAVGMGSPHENCVVCKRLNAPRALCNDTDDEMKYAT 101
           MYH+SCI+PAVKEIP KSW+CA+CTA G+G  H+NCVVC++LN  + L +D   E  + T
Sbjct: 1   MYHLSCIEPAVKEIPRKSWFCANCTANGIGCRHKNCVVCEQLNVLKTL-DDFVGEENFPT 59

Query: 102 IERTFSKFEETSNCSRDDFRQPPVGNKSSCVCKICGSEVENGEKVKICEHNGCPYKYYHV 161
            E T ++ EE SNC+ D  +    G  SS  CKIC   V+ GEKVKIC H+ CP KYYHV
Sbjct: 60  NEETLNELEEYSNCTYDGIQVSTDGRNSS-NCKICKMAVD-GEKVKICGHSFCPSKYYHV 117

Query: 162 RCLTTNLLKSYGPRWYCSSCLCRVCLLDRDDHQIVLCDGCDHAFHLYCLNPPRTSVPRGK 221
           RCL++  LKSYG  WYC SC+C+VCL D+DD +IVLCDGCDHA+H+YC+ PP+ S+P+GK
Sbjct: 118 RCLSSKQLKSYGNCWYCPSCICQVCLTDKDDDKIVLCDGCDHAYHIYCMKPPQNSIPKGK 177

Query: 222 WFCRQCDVKIKEIRRVKKAYEKQGNRMKRKDEMGRSACENLGKKLDVNCDQESDKDREPM 281
           WFC +C+  I+ IR+ +KAYE +  ++ + D       E++ KK +    +ESDK    M
Sbjct: 178 WFCIKCEAGIQAIRQARKAYESKKGKVGQNDSKPN---EDIDKKWNKKRGRESDKVGGMM 234

Query: 282 EMLVKAA--LNFEEKMPGI 298
           +ML+ AA  LN EE M  +
Sbjct: 235 DMLINAANTLNSEEDMNAM 253


>Glyma13g23910.1 
          Length = 2142

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 157  KYYHVRCLTTNLLKSYG---------PRWYCSSCLCRVCLLDRDDHQIVLCDGCDHAFHL 207
            +Y  + CL+  + K  G         P+      +C+VC +DRDD  ++LCD CD  +H 
Sbjct: 1257 EYAKLECLSAEMRKEVGDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHT 1316

Query: 208  YCLNPPRTSVPRGKWFCRQCDVKIKEIRRVKKAYEKQGNRMKRK 251
            YCLNPP   +P G W+C  C V     + V +  +  G R  +K
Sbjct: 1317 YCLNPPLARIPEGNWYCPSCVVGKHATQNVTERTQVIGKRQSKK 1360


>Glyma19g01310.1 
          Length = 2092

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 9/104 (8%)

Query: 157  KYYHVRCLTTNLLKSYG---------PRWYCSSCLCRVCLLDRDDHQIVLCDGCDHAFHL 207
            +Y  V CL+  + K            P+      +C+VC +DRDD  ++LCD CD  +H 
Sbjct: 1194 EYAKVECLSAEMRKEVVDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHT 1253

Query: 208  YCLNPPRTSVPRGKWFCRQCDVKIKEIRRVKKAYEKQGNRMKRK 251
            YCLNPP   +P G W+C  C    +  + V +  +  G R  +K
Sbjct: 1254 YCLNPPLARIPEGNWYCPSCVDGKRATQDVTERTKIIGKRQSKK 1297


>Glyma18g14500.1 
          Length = 206

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 14/96 (14%)

Query: 183 CRVCLLDRDDHQIVLCDGCDHAFHLYCLNPPRTSVPRGKWFCRQCD-------------- 228
           C VC       +++LCD CD  +HL+CL P    VP+G WFC  C               
Sbjct: 25  CEVCSGGHSPSKLILCDKCDRGYHLFCLRPILPYVPKGSWFCPSCSNHKPKSFPLVQTKI 84

Query: 229 VKIKEIRRVKKAYEKQGNRMKRKDEMGRSACENLGK 264
           +    I+R  +A   Q  R KRK   G    +  GK
Sbjct: 85  IDFFRIQRSPEALSNQDTRRKRKQGGGLVVTKKKGK 120


>Glyma18g52260.1 
          Length = 334

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 14/113 (12%)

Query: 194 QIVLCDGCDHAFHLYCLNPPRTSVPRGKWFCRQCD--------------VKIKEIRRVKK 239
           +++LCD CD  +HL+CL P   SVP+G WFC  C               +    I+R  +
Sbjct: 36  KLLLCDKCDRGYHLFCLRPILPSVPKGSWFCPSCSNHKPKCFPLVQTKIIDFFRIQRSPE 95

Query: 240 AYEKQGNRMKRKDEMGRSACENLGKKLDVNCDQESDKDREPMEMLVKAALNFE 292
           A   Q  R KRK   G    +   K L     ++  +  E M  L  A +  E
Sbjct: 96  ALANQDTRKKRKRGGGLVVSKKKRKLLAFVPSEDPKRRLEQMASLATALIATE 148



 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 15 LEQFCTCRHCGGKADGRDCLVCDSCEEMYHVSCIQPAVKEIPLKSWYCASCT 66
          L    +C  CGG       L+CD C+  YH+ C++P +  +P  SW+C SC+
Sbjct: 19 LNDDVSCEECGGGHSPSKLLLCDKCDRGYHLFCLRPILPSVPKGSWFCPSCS 70


>Glyma02g10600.1 
          Length = 334

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 14/72 (19%)

Query: 194 QIVLCDGCDHAFHLYCLNPPRTSVPRGKWFCRQCD--------------VKIKEIRRVKK 239
           +++LCD CD  +HL+CL P   SVP+G WFC  C               +    I+R  +
Sbjct: 36  KLILCDKCDRGYHLFCLRPILPSVPKGSWFCPSCSNHKPKSFPLVQTKIIDFFRIQRSPE 95

Query: 240 AYEKQGNRMKRK 251
           A   Q  R KRK
Sbjct: 96  ALSNQDTRRKRK 107



 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 15 LEQFCTCRHCGGKADGRDCLVCDSCEEMYHVSCIQPAVKEIPLKSWYCASCT 66
          L    +C  CGG       ++CD C+  YH+ C++P +  +P  SW+C SC+
Sbjct: 19 LNDDVSCEECGGGHSPSKLILCDKCDRGYHLFCLRPILPSVPKGSWFCPSCS 70


>Glyma04g00320.1 
          Length = 488

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)

Query: 20  TCRHCGGKADGRDCLVCDSCEEMYHVSCIQPAVKEIPLKSWYCASC 65
           +C+ CG   +  + L+CD CE+ YH+SC  P +K++P+  W+C SC
Sbjct: 252 SCKICGDLDNSLNMLLCDHCEDAYHLSCYNPRLKKLPIDEWFCHSC 297


>Glyma09g06730.1 
          Length = 619

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 172 YGPRWYCSSCLCRVCLLDRDDHQIVLCDG-CDHAFHLYCLNPP--RTSVPRGK--WFCRQ 226
           Y    +C++C       D D   I+LCDG C+ AFH  CLNPP    ++P G   WFC+ 
Sbjct: 134 YHENIFCANCKLHEAFPDND---IILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCKF 190

Query: 227 CDVKIKEIRRVKKAY 241
           C+ KI EI     A+
Sbjct: 191 CECKI-EILEATNAH 204