Jatropha Genome Database

JcCB0095581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0095581.10 + phase: 1 /partial
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g31870.1                                                       263   6e-71
Glyma13g03380.1                                                       237   5e-63
Glyma09g31890.1                                                       233   5e-62
Glyma09g31880.1                                                       214   5e-56
Glyma09g31870.2                                                       178   2e-45

>Glyma09g31870.1 
          Length = 219

 Score =  263 bits (672), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 140/171 (81%), Gaps = 2/171 (1%)

Query: 4   KTAKIDRILMCWWAFTGLTHVILEGYFAFSPEFYKEKTPFYLAEVWKEYSKGDSRYAARD 63
           K  K+DR+LMCWWAFTGLTH+ILEGYF FSPEF+K+KT FYLAEVWKEYSKGDSRYA RD
Sbjct: 49  KKTKVDRVLMCWWAFTGLTHIILEGYFVFSPEFFKDKTGFYLAEVWKEYSKGDSRYAGRD 108

Query: 64  AGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYGTAVYFITAFLEGDN 123
           AG+V+VEG+TAVLEGPASLLAVYAIAT KSYSYILQFAISLGQLYGTAVY+ITA LEGDN
Sbjct: 109 AGVVTVEGITAVLEGPASLLAVYAIATGKSYSYILQFAISLGQLYGTAVYYITAILEGDN 168

Query: 124 FXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKICAAFEAQG--QKKTKTR 172
           F                SW+VIP II+IRCW+KICAAF  QG   KK K R
Sbjct: 169 FSTNSFYYYAYYIGANASWIVIPLIIAIRCWRKICAAFRVQGGQTKKPKVR 219


>Glyma13g03380.1 
          Length = 165

 Score =  237 bits (605), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 132/163 (80%), Gaps = 1/163 (0%)

Query: 2   LSKTAKIDRILMCWWAFTGLTHVILEGYFAFSPEFYKEKTPFYLAEVWKEYSKGDSRYAA 61
           L+KT KI+R+LMCWWAFTGLTH+I+EGYF FSPE +K+KT F+LAEVWKEYSK DSRYA 
Sbjct: 2   LNKT-KIERLLMCWWAFTGLTHIIIEGYFVFSPELFKDKTGFFLAEVWKEYSKADSRYAG 60

Query: 62  RDAGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYGTAVYFITAFLEG 121
           RDAG+V++EGLTAVLEGPASLLAVY IAT KSY+YILQFAISLGQLYG AVY+ITA LEG
Sbjct: 61  RDAGVVTIEGLTAVLEGPASLLAVYTIATGKSYNYILQFAISLGQLYGVAVYYITAILEG 120

Query: 122 DNFXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKICAAFEAQ 164
           DNF                 W  IPSII+IR W+KICAAF+ Q
Sbjct: 121 DNFSASSFYYYAYYIGANALWTSIPSIIAIRSWRKICAAFQVQ 163


>Glyma09g31890.1 
          Length = 260

 Score =  233 bits (595), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 132/174 (75%), Gaps = 3/174 (1%)

Query: 1   RLSKTAKIDRILMCWWAFTGLTHVILEGYFAFSPEFYKEKTPFYLAEVWKEYSKGDSRYA 60
           RL KT K+DR+LMCWW FTGLTH+I+ GY+ FSPEF+K+K+ FY+AEVWKEYSK DSRYA
Sbjct: 88  RLKKT-KVDRVLMCWWVFTGLTHMIIGGYYVFSPEFFKDKSGFYMAEVWKEYSKADSRYA 146

Query: 61  ARDAGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYGTAVYFITAFLE 120
            R+A +V+ E LTAVL GP  LLAVYAIAT K+YSYILQFAISLGQLYG+A Y+ITA LE
Sbjct: 147 GRNAVVVTFESLTAVLVGPPCLLAVYAIATGKTYSYILQFAISLGQLYGSAFYYITAILE 206

Query: 121 GDNFXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKICAAFEAQG--QKKTKTR 172
           GDNF                SW+VIPSI+ IRCW KICAAF  QG   KK K R
Sbjct: 207 GDNFSVNSFYYYAYYIGANASWIVIPSIVGIRCWGKICAAFRIQGGQTKKPKVR 260


>Glyma09g31880.1 
          Length = 204

 Score =  214 bits (544), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 103/157 (65%), Positives = 120/157 (76%), Gaps = 1/157 (0%)

Query: 1   RLSKTAKIDRILMCWWAFTGLTHVILEGYFAFSPEFYKEKTPFYLAEVWKEYSKGDSRYA 60
           RL KT  +DR+LMCW AFTGLTH I+EGYF FSPEF+K++  FYLAEVWKEYSK DSRYA
Sbjct: 48  RLMKTT-VDRLLMCWLAFTGLTHTIIEGYFVFSPEFFKDRNGFYLAEVWKEYSKADSRYA 106

Query: 61  ARDAGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYGTAVYFITAFLE 120
            R+A +V  EG TAV  GPA LLAVYAIAT+KSYSYILQF++SLGQLYG AVY+IT  LE
Sbjct: 107 GRNAAVVGFEGPTAVFVGPACLLAVYAIATEKSYSYILQFSVSLGQLYGIAVYYITGILE 166

Query: 121 GDNFXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKI 157
           GD+F                 W+VIPSI++IRCW+KI
Sbjct: 167 GDDFSASLFYYYAYYILANSPWIVIPSIVAIRCWRKI 203


>Glyma09g31870.2 
          Length = 171

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 98/125 (78%), Gaps = 2/125 (1%)

Query: 50  KEYSKGDSRYAARDAGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYG 109
           KEYSKGDSRYA RDAG+V+VEG+TAVLEGPASLLAVYAIAT KSYSYILQFAISLGQLYG
Sbjct: 47  KEYSKGDSRYAGRDAGVVTVEGITAVLEGPASLLAVYAIATGKSYSYILQFAISLGQLYG 106

Query: 110 TAVYFITAFLEGDNFXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKICAAFEAQG--QK 167
           TAVY+ITA LEGDNF                SW+VIP II+IRCW+KICAAF  QG   K
Sbjct: 107 TAVYYITAILEGDNFSTNSFYYYAYYIGANASWIVIPLIIAIRCWRKICAAFRVQGGQTK 166

Query: 168 KTKTR 172
           K K R
Sbjct: 167 KPKVR 171