Jatropha Genome Database

JcCB0094931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0094931.10 - phase: 0 
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g04180.1                                                       236   4e-63
Glyma01g41230.2                                                       236   4e-63
Glyma01g41230.1                                                       236   4e-63
Glyma05g05650.1                                                       233   5e-62
Glyma17g15950.3                                                       230   4e-61
Glyma17g15950.1                                                       228   2e-60
Glyma17g15930.1                                                       222   8e-59
Glyma05g05620.3                                                       220   3e-58
Glyma05g05620.1                                                       220   3e-58
Glyma11g04180.2                                                       164   2e-41
Glyma17g15950.2                                                       159   9e-40
Glyma05g05620.2                                                       154   3e-38

>Glyma11g04180.1 
          Length = 286

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 111/135 (82%), Positives = 117/135 (86%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYGLIH RYILT+KGMAAML+KYKNYDFGRCPRVYC GQPC+
Sbjct: 152 GDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCI 211

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPRSSTVKIYCP+              IDGAYFGTTFPHLFLMTYG LKPQK +
Sbjct: 212 PVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPS 271

Query: 126 QSYVPRVFGFKLHKP 140
           QSYVPRVFGFKLHKP
Sbjct: 272 QSYVPRVFGFKLHKP 286


>Glyma01g41230.2 
          Length = 285

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 111/135 (82%), Positives = 117/135 (86%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYGLIH RYILT+KGMAAML+KYKNYDFGRCPRVYC GQPC+
Sbjct: 151 GDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCI 210

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPRSSTVKIYCP+              IDGAYFGTTFPHLFLMTYG LKPQK +
Sbjct: 211 PVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPS 270

Query: 126 QSYVPRVFGFKLHKP 140
           QSYVPRVFGFKLHKP
Sbjct: 271 QSYVPRVFGFKLHKP 285


>Glyma01g41230.1 
          Length = 285

 Score =  236 bits (603), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 111/135 (82%), Positives = 117/135 (86%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYGLIH RYILT+KGMAAML+KYKNYDFGRCPRVYC GQPC+
Sbjct: 151 GDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCI 210

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPRSSTVKIYCP+              IDGAYFGTTFPHLFLMTYG LKPQK +
Sbjct: 211 PVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPS 270

Query: 126 QSYVPRVFGFKLHKP 140
           QSYVPRVFGFKLHKP
Sbjct: 271 QSYVPRVFGFKLHKP 285


>Glyma05g05650.1 
          Length = 261

 Score =  233 bits (594), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 110/135 (81%), Positives = 116/135 (85%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYGLIH RY+LT+KGMAAML+KYKNYDFGRCPRVYC GQPCL
Sbjct: 127 GDMFTEEQNELIESAAEMLYGLIHARYVLTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCL 186

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPRSSTVKIYCP+              IDGAYFGTTFPHLFLMTYG LKPQK A
Sbjct: 187 PVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPA 246

Query: 126 QSYVPRVFGFKLHKP 140
           Q YVPRVFGFK+HKP
Sbjct: 247 QGYVPRVFGFKVHKP 261


>Glyma17g15950.3 
          Length = 261

 Score =  230 bits (586), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 108/135 (80%), Positives = 116/135 (85%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYG+IH RY+LT+KGMAAML+KYK+YDFGRCPRVYC GQPCL
Sbjct: 127 GDMFTEEQNELIESAAEMLYGMIHARYVLTSKGMAAMLDKYKSYDFGRCPRVYCSGQPCL 186

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPRSSTVKIYCP+              IDGAYFGTTFPHLFLMTYG LKPQK A
Sbjct: 187 PVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPA 246

Query: 126 QSYVPRVFGFKLHKP 140
           Q YVPRVFGFK+HKP
Sbjct: 247 QGYVPRVFGFKVHKP 261


>Glyma17g15950.1 
          Length = 264

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 116/138 (84%), Gaps = 16/138 (11%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYG+IH RY+LT+KGMAAML+KYK+YDFGRCPRVYC GQPCL
Sbjct: 127 GDMFTEEQNELIESAAEMLYGMIHARYVLTSKGMAAMLDKYKSYDFGRCPRVYCSGQPCL 186

Query: 79  PVGQSDIPRSSTVKIYCPK----------------YIDGAYFGTTFPHLFLMTYGHLKPQ 122
           PVGQSDIPRSSTVKIYCP+                 IDGAYFGTTFPHLFLMTYG LKPQ
Sbjct: 187 PVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGICLDIDGAYFGTTFPHLFLMTYGQLKPQ 246

Query: 123 KAAQSYVPRVFGFKLHKP 140
           K AQ YVPRVFGFK+HKP
Sbjct: 247 KPAQGYVPRVFGFKVHKP 264


>Glyma17g15930.1 
          Length = 261

 Score =  222 bits (566), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 104/133 (78%), Positives = 114/133 (85%), Gaps = 12/133 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GD FTE+QNEL+ESAAEMLYGLIH RYILT+KGMAAML KYKNYDFGRCPRV+C GQPCL
Sbjct: 128 GDTFTEDQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYDFGRCPRVFCSGQPCL 187

Query: 79  PVGQSDIPRSSTVKIYCPK------------YIDGAYFGTTFPHLFLMTYGHLKPQKAAQ 126
           PVGQSD+PRSSTVKIYCP+             IDGAYFG TFPHLFLMTYG+LKPQK +Q
Sbjct: 188 PVGQSDVPRSSTVKIYCPRCEDIYYPKSKYQDIDGAYFGATFPHLFLMTYGNLKPQKQSQ 247

Query: 127 SYVPRVFGFKLHK 139
           +YVPRVFGFK+HK
Sbjct: 248 NYVPRVFGFKVHK 260


>Glyma05g05620.3 
          Length = 256

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 103/133 (77%), Positives = 114/133 (85%), Gaps = 12/133 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GD FTE+QNEL+ESAAEMLYGLIH RYILT+KGMAAML KYKNY+FGRCPRV+C GQPCL
Sbjct: 123 GDTFTEDQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYNFGRCPRVFCSGQPCL 182

Query: 79  PVGQSDIPRSSTVKIYCPK------------YIDGAYFGTTFPHLFLMTYGHLKPQKAAQ 126
           PVGQSD+PRSSTVKIYCP+             IDGAYFG TFPHLFLMTYG+LKPQK +Q
Sbjct: 183 PVGQSDVPRSSTVKIYCPRCEDMYHPKSKYQDIDGAYFGATFPHLFLMTYGNLKPQKQSQ 242

Query: 127 SYVPRVFGFKLHK 139
           +YVPRVFGFK+HK
Sbjct: 243 NYVPRVFGFKVHK 255


>Glyma05g05620.1 
          Length = 257

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 103/134 (76%), Positives = 114/134 (85%), Gaps = 13/134 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GD FTE+QNEL+ESAAEMLYGLIH RYILT+KGMAAML KYKNY+FGRCPRV+C GQPCL
Sbjct: 123 GDTFTEDQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYNFGRCPRVFCSGQPCL 182

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSD+PRSSTVKIYCP+              IDGAYFG TFPHLFLMTYG+LKPQK +
Sbjct: 183 PVGQSDVPRSSTVKIYCPRCEDMYHPKSKYQGNIDGAYFGATFPHLFLMTYGNLKPQKQS 242

Query: 126 QSYVPRVFGFKLHK 139
           Q+YVPRVFGFK+HK
Sbjct: 243 QNYVPRVFGFKVHK 256


>Glyma11g04180.2 
          Length = 254

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 84/98 (85%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYGLIH RYILT+KGMAAML+KYKNYDFGRCPRVYC GQPC+
Sbjct: 152 GDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCI 211

Query: 79  PVGQSDIPRSSTVKIYCPKYIDGAYFGTTFPHLFLMTY 116
           PVGQSDIPRSSTVKIYCP+  D  Y  + +    L+ Y
Sbjct: 212 PVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILICY 249


>Glyma17g15950.2 
          Length = 263

 Score =  159 bits (402), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 71/82 (86%), Positives = 78/82 (95%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GDMFTEEQNEL+ESAAEMLYG+IH RY+LT+KGMAAML+KYK+YDFGRCPRVYC GQPCL
Sbjct: 127 GDMFTEEQNELIESAAEMLYGMIHARYVLTSKGMAAMLDKYKSYDFGRCPRVYCSGQPCL 186

Query: 79  PVGQSDIPRSSTVKIYCPKYID 100
           PVGQSDIPRSSTVKIYCP+  D
Sbjct: 187 PVGQSDIPRSSTVKIYCPRCED 208


>Glyma05g05620.2 
          Length = 217

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 69/82 (84%), Positives = 76/82 (92%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           GD FTE+QNEL+ESAAEMLYGLIH RYILT+KGMAAML KYKNY+FGRCPRV+C GQPCL
Sbjct: 123 GDTFTEDQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYNFGRCPRVFCSGQPCL 182

Query: 79  PVGQSDIPRSSTVKIYCPKYID 100
           PVGQSD+PRSSTVKIYCP+  D
Sbjct: 183 PVGQSDVPRSSTVKIYCPRCED 204