Jatropha Genome Database

JcCB0091771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0091771.10 - phase: 0 /partial
         (294 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41090.1                                                       481   e-136
Glyma06g13760.1                                                       478   e-135
Glyma06g13760.2                                                       413   e-116
Glyma07g27060.1                                                       122   5e-28
Glyma01g39910.1                                                        92   6e-19
Glyma11g05370.1                                                        89   6e-18
Glyma13g09190.1                                                        67   2e-11

>Glyma04g41090.1 
          Length = 459

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/289 (80%), Positives = 263/289 (91%), Gaps = 6/289 (2%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GLVAI+SGLFGN+LVD L LG VAPFDAA+CFLAIGMAIILSSWTEN+GDPSENKDLL+
Sbjct: 175 NGLVAILSGLFGNVLVDTLALGPVAPFDAASCFLAIGMAIILSSWTENFGDPSENKDLLT 234

Query: 66  QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
           QF+ AAVAIAS    EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN EEIPHGFIFATFM
Sbjct: 235 QFRGAAVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFM 291

Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
           LASMLGSS+ASRLM+ SS +VESYMQIVF +S+A+L+LP++T+FL+VP+GVKGGSISFSG
Sbjct: 292 LASMLGSSLASRLMSRSSLRVESYMQIVFAVSSAALMLPILTTFLVVPSGVKGGSISFSG 351

Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
           C+QLLGFC FE+CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNVDAFP
Sbjct: 352 CIQLLGFCAFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFP 411

Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAM-REMEAEPLN 293
           I VMFGMCSIFL VA +LQRRLMVI  S K ++ DW    R+ E+EPLN
Sbjct: 412 ITVMFGMCSIFLLVACILQRRLMVI--SDKPKTEDWQMKDRDAESEPLN 458


>Glyma06g13760.1 
          Length = 459

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/289 (80%), Positives = 262/289 (90%), Gaps = 6/289 (2%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GLVAI+SGLFGN+LVD L LG VAPFDAA+CFLAIGMAIILSSW+EN+GDPSENKDLL+
Sbjct: 175 NGLVAILSGLFGNVLVDTLALGPVAPFDAASCFLAIGMAIILSSWSENFGDPSENKDLLT 234

Query: 66  QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
           QF+ AAVAIAS    EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN EEIPHGFIFATFM
Sbjct: 235 QFRGAAVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFM 291

Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
           LASMLGSS+ASRLMA SS +VESYMQIVF +S+A+L+LP++T+FL+ P+GVKGGSISFSG
Sbjct: 292 LASMLGSSLASRLMARSSLRVESYMQIVFAVSSAALMLPILTTFLVAPSGVKGGSISFSG 351

Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
           C+QLLGFC FE+CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNVDAFP
Sbjct: 352 CIQLLGFCAFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFP 411

Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAM-REMEAEPLN 293
           I VMFGMCSIFL VA +LQRRLMVI  S K ++ DW    R+ E+EPLN
Sbjct: 412 ITVMFGMCSIFLLVACILQRRLMVI--SDKPKTEDWQLKDRDAESEPLN 458


>Glyma06g13760.2 
          Length = 431

 Score =  413 bits (1062), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/236 (83%), Positives = 222/236 (94%), Gaps = 3/236 (1%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GLVAI+SGLFGN+LVD L LG VAPFDAA+CFLAIGMAIILSSW+EN+GDPSENKDLL+
Sbjct: 175 NGLVAILSGLFGNVLVDTLALGPVAPFDAASCFLAIGMAIILSSWSENFGDPSENKDLLT 234

Query: 66  QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
           QF+ AAVAIAS    EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN EEIPHGFIFATFM
Sbjct: 235 QFRGAAVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFM 291

Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
           LASMLGSS+ASRLMA SS +VESYMQIVF +S+A+L+LP++T+FL+ P+GVKGGSISFSG
Sbjct: 292 LASMLGSSLASRLMARSSLRVESYMQIVFAVSSAALMLPILTTFLVAPSGVKGGSISFSG 351

Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNV 241
           C+QLLGFC FE+CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNV
Sbjct: 352 CIQLLGFCAFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407


>Glyma07g27060.1 
          Length = 202

 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 64/73 (87%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GLVAI+ GLFGN+LVD L LG VAPFD A CFLAIGMAIILSSWTEN+GDPSENKDLL+
Sbjct: 48  NGLVAILFGLFGNVLVDTLALGPVAPFDVALCFLAIGMAIILSSWTENFGDPSENKDLLT 107

Query: 66  QFKAAAVAIASGE 78
           QF+ A +AIASG 
Sbjct: 108 QFRGATMAIASGR 120


>Glyma01g39910.1 
          Length = 449

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 115/253 (45%), Gaps = 27/253 (10%)

Query: 11  IMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLSQFKAA 70
           I S +F N L+ N      AP  AA  F AI    I   WTEN G  S     L ++  A
Sbjct: 196 IASQMFANWLIGNNTEKNTAPSSAAIFFAAICFTFITRGWTENPGSAS-----LKEYSHA 250

Query: 71  AVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFMLASML 130
             A   G+  ++I LL   Q+    S   F  LW P++  +G E+  G I+  F+ + ML
Sbjct: 251 FYAYILGD--KRIWLLAWAQTCLHFSTGIFWILWAPTVVADGREVQLGLIYPCFLGSRML 308

Query: 131 GSSIASRLMAH-SSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSGCVQL 189
           GS+    L +  SS + E  + I ++I A   LL  I ++     GV          V L
Sbjct: 309 GSTAFPCLTSGPSSLRTEDCLVIAYIILA---LLLSIVAYDYQEIGVL---------VTL 356

Query: 190 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVL-----YNVDAF 244
             FC F ACVG   PS+ ++R+ Y+P E R  +M F   P N  + + +     Y     
Sbjct: 357 --FCLFHACVGFVLPSLARLRTMYVPNELRGGMMGFSLAPANAAILLSVVQGGYYRNVGN 414

Query: 245 PIIVMFGMCSIFL 257
             ++ FG+C + L
Sbjct: 415 AALMAFGVCGLLL 427


>Glyma11g05370.1 
          Length = 450

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 114/253 (45%), Gaps = 27/253 (10%)

Query: 11  IMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLSQFKAA 70
           I S +F N L+ N      AP  A   F AI    I   WTEN G  S     L ++  +
Sbjct: 197 IASQMFANWLIGNNTEKITAPSSAVIFFAAICFTFITRGWTENPGSAS-----LKEYSRS 251

Query: 71  AVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFMLASML 130
             A   G+  ++I LL   Q+    S+  F  LW P++  +G E+  G I+  F+ + ML
Sbjct: 252 LYAYILGD--KRIWLLAWAQTCLHFSIGIFWILWAPTVVADGREVHLGLIYPCFLGSRML 309

Query: 131 GSSIASRLMAH-SSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSGCVQL 189
           GS+    L +  SS + E  +   ++I A   LL  I ++     GV            +
Sbjct: 310 GSTAFPCLTSGPSSLRTEDCLVFAYIILA---LLLSIVAYDYQEVGV-----------LV 355

Query: 190 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVL-----YNVDAF 244
           + FC F ACVG   PS+ ++R+ Y+P E R  +M F   P N  + + +     Y     
Sbjct: 356 ILFCLFHACVGFVLPSLARLRTMYVPNELRGGMMGFSLAPANAAILLSVVQGGYYRNVGN 415

Query: 245 PIIVMFGMCSIFL 257
             ++ FG+C + L
Sbjct: 416 AALMAFGVCGLLL 428


>Glyma13g09190.1 
          Length = 152

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 39/45 (86%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSW 50
           +GLVAI+SGLFGN+LVD L LG VAPFDAA+CFLAIG+AI L  +
Sbjct: 94  NGLVAILSGLFGNVLVDTLALGLVAPFDAASCFLAIGVAIALGRF 138