Jatropha Genome Database

JcCB0088661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0088661.10 + phase: 0 /partial
         (771 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27500.1                                                       416   e-116
Glyma15g11480.1                                                       397   e-110

>Glyma13g27500.1 
          Length = 1455

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 309/819 (37%), Positives = 415/819 (50%), Gaps = 121/819 (14%)

Query: 1    IFVRQKNRCSSKAPENPIKAVRWMKTSPLNAEEIECIQEGLKVFKHDWMSVWRFIVPHRD 60
            IFVRQKNRCSSKA ENPIKAVR MKTSPL AEEI CIQEGLK++K DW  VW++IVPHRD
Sbjct: 641  IFVRQKNRCSSKASENPIKAVRRMKTSPLTAEEIACIQEGLKLYKCDWTLVWQYIVPHRD 700

Query: 61   PSLLPRQWRMALGTQRSYKSDAAKKEKRRIYESNRRRSKTAD---LANSQQDNQVDITGG 117
            PSLLPRQWR+ALGTQ+SYK DA+K+EKRR+YESNRR+SK  +     + ++D   +I G 
Sbjct: 701  PSLLPRQWRIALGTQKSYKIDASKREKRRLYESNRRKSKALESWRAISDKEDCDAEIAGS 760

Query: 118  ENNSGDDCVDNVNEAYVHQAFLADWRPDA---CFNLR------EKNLPSGAVLRE----- 163
            E      C+ +    YVHQAFLADWRPD     +  R      E N+   A  +E     
Sbjct: 761  E------CMYSEVVPYVHQAFLADWRPDTSTLTYPERISTTSGEGNVAHNAFSQEDIQFY 814

Query: 164  ------GTRVREHSQIDNVHKFPNARYYQYP-HAVSYFAHARHCPPNSMQLNHQLSNTTL 216
                  G   +   Q  N    P+      P H +S   +     P+++     + + T 
Sbjct: 815  RGTHDYGLSGKVPHQNGNQSALPSVSKLPQPFHTMSDLRNGMKGVPSTINPKKPVFDVT- 873

Query: 217  NATKSQIYMWPYRTHRTDGAHLVKLAPDLPPVNLPPSVRVISQAAFKSNQCRLPMKIPTS 276
              + S+ Y  PYR+ R   AHLVKLAPDLPPVNLPPSVRV+SQ AFK  QC      P  
Sbjct: 874  --SSSKYYCRPYRSRRAHNAHLVKLAPDLPPVNLPPSVRVVSQTAFKGFQCGTSKVHPP- 930

Query: 277  GGSGVEAGRERENIVPQLLQVVNSRATSLAKAKRDKTNQVTDNITNACSEELTATCAEES 336
             G+GV A R+            +  A+     ++ +             + +T +  E S
Sbjct: 931  -GAGVAACRK------------DYSASQTPHGEKSENVHPVKGARPTLEDSVTGSQLERS 977

Query: 337  AVQNDVCVAEERGNDSDLQMHPLLFQAPEDGCLSYYPPSCSTATPSSFAFFAGNQPQLNL 396
                   +  E+G  +DLQMHPLLFQ  EDG   Y P   S+ T SSF+FF+G+QPQLNL
Sbjct: 978  ETVEGESLVAEKGTRTDLQMHPLLFQVTEDGNAPYCPLKFSSGTSSSFSFFSGSQPQLNL 1037

Query: 397  SLFHAPHQANQISDCLNKSSKTKESISASCGIDFHPLLQRTGEESSELATACSNTHQFVC 456
            SLFH+  Q + I DC NKS K+K+S   S GIDFHPLLQ                     
Sbjct: 1038 SLFHSSQQQSHI-DCANKSLKSKDSTLRSGGIDFHPLLQ--------------------- 1075

Query: 457  LGGKSAQFQNPS--DVVQTKLPVNSP-SATASKPSGPNEKSNELDLEIHLXXXXXXXXXX 513
               KS   Q+P+  D +Q +  VNS   A A++ SG N+KSNELDLEIHL          
Sbjct: 1076 ---KSDDTQSPTSFDAIQPESLVNSGVQAIANRSSGLNDKSNELDLEIHLSSVSGREKSV 1132

Query: 514  GTRDSASNYQPKLMISAPNPVN----------TIEKHKPNNPCHQHG-ENCSTVQSNLVS 562
             +R           + A +PV           +++  +   P  QHG EN S     L S
Sbjct: 1133 KSR----------QLKAHDPVGSKKTVAISGTSMKPQEDTAPYCQHGVENLSAGSCELAS 1182

Query: 563  CGDALAVPSNSDRICNMDDVGDQSHPEIIMXXXXXXXXXXXXXXXXXXXXXXMADSDXXX 622
                L V S++    ++DD+GDQSHPEI+M                      M DS+   
Sbjct: 1183 SA-PLVVSSDNITRYDVDDIGDQSHPEIVMEQEELSDSEEDIEEHVEFECEEMTDSEGED 1241

Query: 623  XXXXXXXXXXPDKEITCSATEEVTT---------EWKSTIHTDGNSSIPGKASPFLKLSL 673
                       +KE+  S+ E V           E ++   T+ +  +  + S  L ++L
Sbjct: 1242 GSGCEQALEVQNKEVPISSEENVVKYMDCMKKPCEPRANYGTEVDGGLL-RNSTTLNIAL 1300

Query: 674  TSM-RKESSSSAWLTLDSCAAVDPPRINAKYEECTIGACPVAKKLISGRPNRSCKKTTQS 732
            T+  + + S+S+WL+LDSC A +P    A  ++ T+G    +K    G+  R        
Sbjct: 1301 TNEGQDDRSNSSWLSLDSCTADNPVLSKAILQQSTLGEASASKNFSIGKAVRE------- 1353

Query: 733  MRTVVTEKDVMDMAQQLSLGPLAVSTLKKPRKRACRTNA 771
                  E+  +DM  QLS+GP   +T +K RKR+ ++NA
Sbjct: 1354 ------ERHTVDMVHQLSVGPHVSTTPRKLRKRSSKSNA 1386


>Glyma15g11480.1 
          Length = 1439

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 322/825 (39%), Positives = 417/825 (50%), Gaps = 132/825 (16%)

Query: 1    IFVRQKNRCSSKAPENPIKAVRWMKTSPLNAEEIECIQEGLKVFKHDWMSVWRFIVPHRD 60
            IFVRQKN CSSKA ENPIKAVR MKTSPL AEEI CIQEGLK++K DW  VW++IVPHRD
Sbjct: 636  IFVRQKNHCSSKALENPIKAVRRMKTSPLTAEEIACIQEGLKIYKCDWTLVWQYIVPHRD 695

Query: 61   PSLLPRQWRMALGTQRSYKSDAAKKEKRRIYESNRRRSKTAD---LANSQQDNQVDITGG 117
            PSLLPRQWR+ALGTQ+SYK DA+K+EKRR+YESNRR+ K  +     + ++D   +I G 
Sbjct: 696  PSLLPRQWRIALGTQKSYKIDASKREKRRLYESNRRKLKALESWRAISDKEDCDAEIAGS 755

Query: 118  ENNSGDDCVDNVNEA-YVHQAFLADWRPDA-------CFNL--REKNLPSGAVLREGTRV 167
            E      C+D      YVHQAFLADWRP         C +   RE N+   A  ++  + 
Sbjct: 756  E------CMDYSEVVPYVHQAFLADWRPHTSTLTYPECISTTSREGNVAHNAFSQKDIQF 809

Query: 168  RE-----------------HSQIDNVHKFPNARYYQYPHAVSYFAHARHCPPNSMQLNHQ 210
                                S + +V K P     Q  H  S   +     P+++     
Sbjct: 810  YRGTHDYGLSGKVPLENGNQSALPSVSKLP-----QLFHTTSDLRNGMKGAPSTINPKKP 864

Query: 211  LSNTTLNATKSQIYMWPYRTHRTDGAHLVKLAPDLPPVNLPPSVRVISQAAFKSNQCRL- 269
            + + T   + S+ Y  PYR+ R   AHLVKLAP LPPVNLPPSVR++SQ AFK  QC   
Sbjct: 865  VFDVT---SSSKYYCRPYRSRRAHNAHLVKLAPGLPPVNLPPSVRIVSQTAFKGFQCGTS 921

Query: 270  PMKIPTSGGSGVEAGRERENIVPQLLQVVNSRATSLAKAKRDKTNQVTDNITNACSEELT 329
             + +P   G+GV A R ++N   Q      S      K  R     + D++T        
Sbjct: 922  KVHLP---GAGVAACR-KDNSSSQTPHGEKSENVHPVKGARPT---LEDSVTG------- 967

Query: 330  ATCAEESAVQNDVCVAEERGNDSDLQMHPLLFQAPEDGCLSYYPPSCSTATPSSFAFFAG 389
            +       V++   VA E+G  SDLQMHPLLFQ  EDG + YYP   S+ T SSF+FF+G
Sbjct: 968  SQLGRSDTVEDGSLVA-EKGTSSDLQMHPLLFQVTEDGNVPYYPLKFSSGTSSSFSFFSG 1026

Query: 390  NQPQLNLSLFHAPHQANQISDCLNKSSKTKESISASCGIDFHPLLQRTGEESSELATACS 449
            +QPQLNLSLFH+  Q + I DC NKS K K+S   S GIDFHPLLQ              
Sbjct: 1027 SQPQLNLSLFHSSQQQSHI-DCANKSLKLKDSTLRSGGIDFHPLLQ-------------- 1071

Query: 450  NTHQFVCLGGKSAQFQNPS--DVVQTKLPVNSP-SATASKPSGPNEKSNELDLEIHLXXX 506
                      KS   Q+P+  D +Q +  VNS   A AS+ SG N+KSNELDLEIHL   
Sbjct: 1072 ----------KSDDTQSPTSFDAIQPESLVNSGVQAIASRSSGLNDKSNELDLEIHL--- 1118

Query: 507  XXXXXXXGTRDSASNYQPKLMISAPNPVNTIEK-------HKPNNP----CHQHGENCST 555
                   G   S  + Q K    A +PV + +         KP       C Q  EN S 
Sbjct: 1119 ---SSVSGREKSVKSRQLK----AHDPVGSKKTVAISGTAMKPQEDTAPYCQQGVENLSA 1171

Query: 556  VQSNLVSCGDALAVPSNSDRICNMDDVGDQSHPEIIMXXXXXXXXXXXXXXXXXXXXXXM 615
                L S    L VP+++    ++DD+GDQSHPEI+M                      M
Sbjct: 1172 GSCELASSA-PLVVPNDNITRYDVDDIGDQSHPEIVMEQEELSDSEEDIEEHVEFECEEM 1230

Query: 616  ADSDXXXXXXXXXXXXXPDKEITCSATEEVTTE---WKSTIHTDGN--SSIPGKA---SP 667
             DS+              +KE+  S+ E V       K      GN  + + G     S 
Sbjct: 1231 TDSEGEDGSGCEQALEVQNKEVPISSEENVVKYMDCMKKPCEPRGNYGTEVDGGLLTNST 1290

Query: 668  FLKLSLTS-MRKESSSSAWLTLDSCAAVDPPRINAKYEECTIGACPVAKKLISGRPNRSC 726
             L ++LT+  + + SSS+WL+LDSC A +P    A  ++ TIG    +K    G+  R  
Sbjct: 1291 ALNIALTNDGQDDRSSSSWLSLDSCTADNPVLSKAILQQSTIGEASASKIFSIGKAVRE- 1349

Query: 727  KKTTQSMRTVVTEKDVMDMAQQLSLGPLAVSTLKKPRKRACRTNA 771
                        E+  +DM QQ SLGP    T +K RKR+ ++NA
Sbjct: 1350 ------------ERHTVDMIQQPSLGPHVSITSRKLRKRSGKSNA 1382