Jatropha Genome Database

JcCB0086571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0086571.10 - phase: 0 
         (386 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g28000.1                                                       535   e-152
Glyma20g32390.1                                                       510   e-145
Glyma10g35170.1                                                       484   e-137

>Glyma02g28000.1 
          Length = 630

 Score =  535 bits (1379), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 271/390 (69%), Positives = 293/390 (75%), Gaps = 14/390 (3%)

Query: 5   TRFRRLGVXXXXXXXXXXXGGFLSPT-FATNDHGVRPA-LDPVKQKITDPNAVVPSRAAQ 62
           TR RRLG            G  L  T  + +DH V  + L  V++KI DP AVVP+R  Q
Sbjct: 2   TRLRRLGAAVGAAMATAYGGAILVSTPVSASDHSVGGSHLAAVREKIHDPFAVVPAREVQ 61

Query: 63  ESVLIGATTANPLDXXXXXXXXXXXXXXXXXXXRGLRVGLVERDDFSSG----------- 111
            S L GA+ ANPLD                   RGLRVGLVER+DFSSG           
Sbjct: 62  RSALTGASAANPLDMLVIGGGATGSGVALDAVTRGLRVGLVEREDFSSGTSSRSTKLIHG 121

Query: 112 -VRYLEKAVFNLDYGQLRLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEVVYYWMGL 170
            VRYLEKAVF LDYGQL+LVFHALEERKQ+IDNAPHLCHALPCMTPCFDWFEVVYYWMGL
Sbjct: 122 GVRYLEKAVFKLDYGQLKLVFHALEERKQLIDNAPHLCHALPCMTPCFDWFEVVYYWMGL 181

Query: 171 KMYDLVAGPRLLHLSRYYSAQESLELFPTLAKKGKDKTLKGTVVYYDGQMNDSRXXXXXX 230
           KMYDLVAG RLLHLSRYYSA+ES+ELFPTLAK+GK ++L+GTVVYYDGQMNDSR      
Sbjct: 182 KMYDLVAGARLLHLSRYYSAKESVELFPTLAKEGKGRSLRGTVVYYDGQMNDSRLNVGLA 241

Query: 231 XXXXXXXXXXXXXXEVISFLKDEADERIIGARIRDNLSGKEFETYAKVVVNAAGPFCDSV 290
                         EV+S LKDEA ERIIGARIRDNL+GKEF+TYAKV+VNAAGPFCDSV
Sbjct: 242 CTAALAGAAVLNHAEVVSLLKDEASERIIGARIRDNLTGKEFDTYAKVIVNAAGPFCDSV 301

Query: 291 RKMAKNDAQPMICPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDS 350
           RKMA   A+ MI PSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDS
Sbjct: 302 RKMADKSARDMISPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDS 361

Query: 351 NTIITPLPEPHEDEIQFILDAISDYLSVKV 380
           NT IT LPEPHEDEIQFILDAISDYL+VKV
Sbjct: 362 NTSITFLPEPHEDEIQFILDAISDYLNVKV 391


>Glyma20g32390.1 
          Length = 628

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/389 (65%), Positives = 286/389 (73%), Gaps = 13/389 (3%)

Query: 5   TRFRRLGVXXXXXXXXXXXGGFL-SPTFATNDHGVRPALDPVKQKITDPNAVVPSRAAQE 63
           TR R+LG              FL S   +  D+G    L+ +++K+ DP AVVP+R AQ+
Sbjct: 2   TRLRKLGAVATATASAYGSVLFLHSSLVSAGDNGGGSPLEALRKKVHDPGAVVPAREAQQ 61

Query: 64  SVLIGATTANPLDXXXXXXXXXXXXXXXXXXXRGLRVGLVERDDFSSG------------ 111
           S L  A  +NPLD                   RGLRVGLVER+DF+SG            
Sbjct: 62  SALKAAGKSNPLDVLVIGGGATGSGTALDAVTRGLRVGLVEREDFASGTSSRSTKLLHGG 121

Query: 112 VRYLEKAVFNLDYGQLRLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEVVYYWMGLK 171
           VRYLEKAVFNLDYGQ +LV HALEERKQVI+NAPHLCHALPCMTPCF WFEVVYYWMGLK
Sbjct: 122 VRYLEKAVFNLDYGQFKLVLHALEERKQVIENAPHLCHALPCMTPCFSWFEVVYYWMGLK 181

Query: 172 MYDLVAGPRLLHLSRYYSAQESLELFPTLAKKGKDKTLKGTVVYYDGQMNDSRXXXXXXX 231
           MYDLVAG +LLHLSRYYS +ES+ELFPTLA+   D++L+GTVVYYDGQMND+R       
Sbjct: 182 MYDLVAGRQLLHLSRYYSTKESVELFPTLARVVNDRSLRGTVVYYDGQMNDARLNVGLAC 241

Query: 232 XXXXXXXXXXXXXEVISFLKDEADERIIGARIRDNLSGKEFETYAKVVVNAAGPFCDSVR 291
                        EV+S LKD+  +RIIGARIRDNL+GKEF+TYAKV+VNA GPFCDS+R
Sbjct: 242 TAALAGAAVLNHAEVVSLLKDDDGKRIIGARIRDNLTGKEFDTYAKVIVNAGGPFCDSIR 301

Query: 292 KMAKNDAQPMICPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSN 351
           KMA  +AQ MI PSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDS+
Sbjct: 302 KMANKNAQEMISPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSS 361

Query: 352 TIITPLPEPHEDEIQFILDAISDYLSVKV 380
           T IT LPEPHEDEIQFILDAISDYL+VKV
Sbjct: 362 TSITYLPEPHEDEIQFILDAISDYLNVKV 390


>Glyma10g35170.1 
          Length = 619

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/397 (61%), Positives = 282/397 (71%), Gaps = 28/397 (7%)

Query: 5   TRFRRLGVXXXXXXXXXXXGGFL---SPTFATNDHGVRPALDPVKQKITDPNAVVPSRAA 61
           TR R+LG            GG L    P  + +DHG    L+ +++K+ D +AVVP+R A
Sbjct: 2   TRLRKLGTVATAIATAY--GGALILHEPLVSASDHGGGSRLEALRKKVHDSDAVVPARKA 59

Query: 62  QESVLIGATTANPLDXXXXXXXXXXXXXXXXXXXRGLRVGLVERDDFSSG---------- 111
           Q S L  A  +NPLD                   RGLRVGLVER+DF++G          
Sbjct: 60  QLSALEAAGKSNPLDVLVIGGGATGSGATLDAVTRGLRVGLVEREDFAAGTSSRSTKLLH 119

Query: 112 --VRYLEKAVFNLDYGQLRLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEVVYYWMG 169
             VRYLEKAVFNLDYGQ +LV HALEERKQVI+NAPHLCHALPCMTPCF WFEVVYYWMG
Sbjct: 120 GGVRYLEKAVFNLDYGQFKLVLHALEERKQVIENAPHLCHALPCMTPCFSWFEVVYYWMG 179

Query: 170 LKMYDLVAGPRLLHLSRYYSAQESLELFPTLAKKGKDKTLKGTVVYYDGQMNDSRXXXXX 229
           LKMYDLVAG +LLHLSRYYS +ES+ELFPTLA++  D+TL+GTVVYYDGQMND+R     
Sbjct: 180 LKMYDLVAGRQLLHLSRYYSTKESVELFPTLAREVNDRTLRGTVVYYDGQMNDARLNVGL 239

Query: 230 XXXXXXXXXXXXXXXEVISFLKDEADERIIGARIRDNLSGKEFETYAKVVVNAAGPFCDS 289
                          EV+S LK++  +R+I         GKEF+TYAKV+VNA GPFCDS
Sbjct: 240 ACTAALAGAAVLNHAEVLSLLKNDDGKRVI---------GKEFDTYAKVIVNAGGPFCDS 290

Query: 290 VRKMAKNDAQPMICPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD 349
           +RKMA  +AQ MI PSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD
Sbjct: 291 IRKMANKNAQEMISPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD 350

Query: 350 SNTIITPLPEPHEDEIQFILDAISDYLSVKV--CDIL 384
           S+T IT LPEPHEDEIQFILDAISDYL+VKV   D+L
Sbjct: 351 SSTSITYLPEPHEDEIQFILDAISDYLNVKVRRADVL 387