Jatropha Genome Database

JcCB0086551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0086551.10 - phase: 0 /partial
         (349 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g22660.1                                                       241   1e-63
Glyma04g07060.1                                                       234   1e-61
Glyma06g26600.1                                                       227   2e-59
Glyma06g07150.1                                                       197   2e-50
Glyma15g21260.1                                                       117   2e-26
Glyma14g12450.1                                                       113   3e-25
Glyma17g12140.1                                                       111   9e-25
Glyma18g38870.1                                                        63   6e-10
Glyma18g38890.1                                                        62   9e-10
Glyma18g38940.1                                                        62   1e-09
Glyma18g39180.1                                                        61   2e-09

>Glyma13g22660.1 
          Length = 403

 Score =  241 bits (615), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 110/135 (81%), Positives = 123/135 (91%)

Query: 1   MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEVHSSATKKNKEWQEKLPVVVLR 60
           MPRPGPRPYECVRRAWHS+RHQP+RGS+IQ+IFRVVN+ HS ATKKNKEWQEKLPVVVL+
Sbjct: 1   MPRPGPRPYECVRRAWHSERHQPVRGSIIQQIFRVVNDAHSPATKKNKEWQEKLPVVVLK 60

Query: 61  AEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTPR 120
           AEEIMYSKANSEAEY++  TLWDR NDA+NTIIRRDE+TETG+LL PC+EAALNLGC P 
Sbjct: 61  AEEIMYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDETTETGDLLPPCVEAALNLGCKPV 120

Query: 121 RASRSQRNCNPRCYL 135
           R SRS R+ NPR YL
Sbjct: 121 RTSRSDRHNNPRTYL 135


>Glyma04g07060.1 
          Length = 275

 Score =  234 bits (597), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/168 (69%), Positives = 137/168 (81%), Gaps = 5/168 (2%)

Query: 1   MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEVHSSATKKNKEWQEKLPVVVLR 60
           MPRPGP+PY+CV+RAWHS+ HQPIRG+LIQEIFRVVNE+H S+TKKNKE+QEKLPVVVLR
Sbjct: 1   MPRPGPKPYDCVKRAWHSEIHQPIRGTLIQEIFRVVNEIHGSSTKKNKEYQEKLPVVVLR 60

Query: 61  AEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTPR 120
           AEEI+YSKANSEAEYMDL TL +RTNDAI+TIIRRDE TETGE L+PCIEAAL+LGC+  
Sbjct: 61  AEEIIYSKANSEAEYMDLTTLLERTNDAIDTIIRRDEHTETGEYLRPCIEAALSLGCSLT 120

Query: 121 RASRSQRNCNPRCYLXXXXXXXXXXXXGIVNDTIRA---NHTASPQCI 165
           +A+RSQRN N RCYL            G +++T      N+T S QC+
Sbjct: 121 KATRSQRN-NQRCYLSRSTEEVPKLSYGTLHNTANTKDHNNTRS-QCV 166


>Glyma06g26600.1 
          Length = 216

 Score =  227 bits (578), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/135 (77%), Positives = 121/135 (89%), Gaps = 1/135 (0%)

Query: 1   MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEVHSSATKKNKEWQEKLPVVVLR 60
           MPRPGPRPYEC+RRAWHS+RHQP+RGS+I++IFRVV E HS+ATK NKEWQEKLP+VVLR
Sbjct: 1   MPRPGPRPYECMRRAWHSERHQPMRGSIIRQIFRVVAEAHSAATKSNKEWQEKLPIVVLR 60

Query: 61  AEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTPR 120
           AEEI+YSKANSEAEY++  TL DR NDAINTIIRRDE+TETG+LL PC+EAALN+GC P 
Sbjct: 61  AEEIIYSKANSEAEYLNPDTLLDRLNDAINTIIRRDETTETGQLLPPCVEAALNIGCKPV 120

Query: 121 RASRSQRNCNPRCYL 135
           R SRS R+ NPR YL
Sbjct: 121 RTSRSDRH-NPRAYL 134


>Glyma06g07150.1 
          Length = 111

 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/110 (83%), Positives = 103/110 (93%)

Query: 1   MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEVHSSATKKNKEWQEKLPVVVLR 60
           MPRPG +PY+CV+RAWHS+ HQPIRG+LIQEIFRVVNE+H S+TKKNKE+QEKLPVVVLR
Sbjct: 1   MPRPGSKPYDCVKRAWHSEIHQPIRGTLIQEIFRVVNEIHGSSTKKNKEYQEKLPVVVLR 60

Query: 61  AEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIE 110
           AEEI+YSKANSEAEYMDLKTL +RTNDAI+TIIRRDE TETGE L PCIE
Sbjct: 61  AEEIIYSKANSEAEYMDLKTLLERTNDAIDTIIRRDEHTETGEYLCPCIE 110


>Glyma15g21260.1 
          Length = 76

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 64/71 (90%)

Query: 40  HSSATKKNKEWQEKLPVVVLRAEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIRRDEST 99
           H S+TKKNK++QEKLPVVVLR EEI+YSKANSEAEYMDL TL +RTNDAI+TI+ RDE T
Sbjct: 4   HGSSTKKNKDYQEKLPVVVLRVEEIIYSKANSEAEYMDLTTLLERTNDAIDTIVSRDEHT 63

Query: 100 ETGELLQPCIE 110
           +TGE L+PCIE
Sbjct: 64  KTGEYLRPCIE 74


>Glyma14g12450.1 
          Length = 77

 Score =  113 bits (282), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/76 (73%), Positives = 66/76 (86%)

Query: 35  VVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANSEAEYMDLKTLWDRTNDAINTIIR 94
           VVNE+H S+TKKNKE+QEKL VVVLRAEEI++SKAN EAEYMDL TL +RTNDAI+TII+
Sbjct: 1   VVNEIHGSSTKKNKEYQEKLHVVVLRAEEIIFSKANFEAEYMDLTTLLERTNDAIDTIIQ 60

Query: 95  RDESTETGELLQPCIE 110
            DE TETGE L+ C +
Sbjct: 61  HDEHTETGEYLRRCFK 76


>Glyma17g12140.1 
          Length = 341

 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 59/71 (83%)

Query: 65  MYSKANSEAEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTPRRASR 124
           MYSKANSEAEY++  TLWDR NDA+NTIIRRDE+TETG LL PC+EAALNLGC   R SR
Sbjct: 1   MYSKANSEAEYLNPDTLWDRLNDAVNTIIRRDETTETGGLLPPCVEAALNLGCKAVRTSR 60

Query: 125 SQRNCNPRCYL 135
           S R+ NPR YL
Sbjct: 61  SDRHNNPRTYL 71


>Glyma18g38870.1 
          Length = 39

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/38 (76%), Positives = 36/38 (94%)

Query: 34 RVVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANS 71
          RVVN++H S+TKKNKE+QEKLP+VVL+A EI+YSKANS
Sbjct: 1  RVVNDIHGSSTKKNKEYQEKLPLVVLKAVEIIYSKANS 38


>Glyma18g38890.1 
          Length = 39

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/39 (74%), Positives = 35/39 (89%)

Query: 34 RVVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANSE 72
          RVVN++H  +TKKNKE+QEKLP+VVLRA EI+YSKAN E
Sbjct: 1  RVVNDIHGFSTKKNKEYQEKLPLVVLRAVEIIYSKANFE 39


>Glyma18g38940.1 
          Length = 39

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/39 (74%), Positives = 35/39 (89%)

Query: 34 RVVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANSE 72
          RVVN++H  +TKKNKE+QEKLP+VVLR  EI+YSKANSE
Sbjct: 1  RVVNDIHGFSTKKNKEYQEKLPLVVLRVVEIIYSKANSE 39


>Glyma18g39180.1 
          Length = 187

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 34/40 (85%)

Query: 34  RVVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANSEA 73
           RVVN++H   TKKNKE+QEKLP+VVL+  EI+YSKANSE 
Sbjct: 81  RVVNDIHGFFTKKNKEYQEKLPLVVLKVVEIIYSKANSEV 120