Jatropha Genome Database

JcCB0085161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0085161.10 - phase: 0 /partial
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31530.1                                                       150   2e-37
Glyma13g38860.1                                                       148   1e-36
Glyma12g10110.1                                                        75   2e-14
Glyma20g31560.1                                                        63   5e-11
Glyma20g31560.2                                                        63   8e-11
Glyma10g36030.1                                                        62   2e-10
Glyma06g24830.1                                                        49   1e-06

>Glyma12g31530.1 
          Length = 250

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 2/87 (2%)

Query: 1  MGDKSSTIATATDDDLLLKSFFAEVSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDV 60
          MGD  +  A+  DDDLLLK+FFAEVSEVERDNEVLRIL+CFKLNPFE+LNLPFDSS +DV
Sbjct: 1  MGD--TNHASTVDDDLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEYLNLPFDSSIDDV 58

Query: 61 KKQYRKLSLLVHPDKCKHPQAKEAFAG 87
          KKQYRKLSL+VHPDKCKHPQAKEAF  
Sbjct: 59 KKQYRKLSLMVHPDKCKHPQAKEAFGA 85


>Glyma13g38860.1 
          Length = 250

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 2/87 (2%)

Query: 1  MGDKSSTIATATDDDLLLKSFFAEVSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDV 60
          MGD  +  A+  DDDLLLK+FFAEVSEVERDNEVLRIL+CFKLNPFE+LNL FDSS +DV
Sbjct: 1  MGD--TNHASTVDDDLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEYLNLSFDSSIDDV 58

Query: 61 KKQYRKLSLLVHPDKCKHPQAKEAFAG 87
          KKQYRKLSL+VHPDKCKHPQAKEAF  
Sbjct: 59 KKQYRKLSLMVHPDKCKHPQAKEAFGA 85


>Glyma12g10110.1 
          Length = 97

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 36/41 (87%)

Query: 46 FEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEAFA 86
           E+ NLPFDSS EDVKKQYRK+SL+V PDKCKHPQ KEAFA
Sbjct: 3  IEYQNLPFDSSAEDVKKQYRKMSLMVQPDKCKHPQTKEAFA 43


>Glyma20g31560.1 
          Length = 628

 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 42/61 (68%)

Query: 25  VSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEA 84
            +E ER  EV RI+     +P++ L +  + S +++KK+Y K+SLLVHPDKC HPQA +A
Sbjct: 271 ANEAERFEEVTRIMEVEADSPYDVLGVNHNMSSDNIKKKYWKMSLLVHPDKCSHPQAHQA 330

Query: 85  F 85
           F
Sbjct: 331 F 331


>Glyma20g31560.2 
          Length = 486

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 42/60 (70%)

Query: 26  SEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEAF 85
           +E ER  EV RI+     +P++ L +  + S +++KK+Y K+SLLVHPDKC HPQA +AF
Sbjct: 272 NEAERFEEVTRIMEVEADSPYDVLGVNHNMSSDNIKKKYWKMSLLVHPDKCSHPQAHQAF 331


>Glyma10g36030.1 
          Length = 573

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%)

Query: 25  VSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEA 84
            +E ER  EV RI+     +P++ L    + S +++KK+Y K+SLLVHPDKC HPQA +A
Sbjct: 273 ANEAERFEEVTRIMEVEADSPYDVLGANHNMSSDNMKKKYWKMSLLVHPDKCSHPQAHQA 332

Query: 85  F 85
           F
Sbjct: 333 F 333


>Glyma06g24830.1 
          Length = 364

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 30/44 (68%)

Query: 42  KLNPFEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEAF 85
           K N +E L L    + EDV+K YRKLSL VHPDK K P A+EAF
Sbjct: 114 KKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAF 157