Jatropha Genome Database

JcCB0085061.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0085061.30 - phase: 1 /partial
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g18750.3                                                       120   7e-28
Glyma08g18750.1                                                       120   7e-28
Glyma08g18750.2                                                       120   7e-28
Glyma15g40140.1                                                       119   2e-27
Glyma08g10290.1                                                       119   2e-27
Glyma08g10250.2                                                       117   4e-27
Glyma08g10250.1                                                       117   4e-27
Glyma08g10230.1                                                       116   9e-27
Glyma05g27300.1                                                       114   3e-26
Glyma05g27290.1                                                        96   2e-20
Glyma15g40140.2                                                        96   2e-20
Glyma08g10280.1                                                        65   4e-11
Glyma18g42590.1                                                        60   9e-10
Glyma19g23200.1                                                        56   1e-08
Glyma16g12780.1                                                        51   5e-07

>Glyma08g18750.3 
          Length = 371

 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 1/123 (0%)

Query: 14  PR-LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYM 72
           PR L++    DI +T           +APTA  K A+PEGE           +IM LS  
Sbjct: 49  PRILIDVSKIDITTTVLGFKISMPIMLAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW 108

Query: 73  SSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADI 132
           ++ +VEEVAS+   IRF+QLYVYK R++ A LV+RAER G+KAI LTVD PRLGRREADI
Sbjct: 109 ATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI 168

Query: 133 KNK 135
           KN+
Sbjct: 169 KNR 171


>Glyma08g18750.1 
          Length = 371

 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 1/123 (0%)

Query: 14  PR-LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYM 72
           PR L++    DI +T           +APTA  K A+PEGE           +IM LS  
Sbjct: 49  PRILIDVSKIDITTTVLGFKISMPIMLAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW 108

Query: 73  SSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADI 132
           ++ +VEEVAS+   IRF+QLYVYK R++ A LV+RAER G+KAI LTVD PRLGRREADI
Sbjct: 109 ATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI 168

Query: 133 KNK 135
           KN+
Sbjct: 169 KNR 171


>Glyma08g18750.2 
          Length = 297

 Score =  120 bits (300), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 1/123 (0%)

Query: 14  PR-LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYM 72
           PR L++    DI +T           +APTA  K A+PEGE           +IM LS  
Sbjct: 49  PRILIDVSKIDITTTVLGFKISMPIMLAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW 108

Query: 73  SSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADI 132
           ++ +VEEVAS+   IRF+QLYVYK R++ A LV+RAER G+KAI LTVD PRLGRREADI
Sbjct: 109 ATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI 168

Query: 133 KNK 135
           KN+
Sbjct: 169 KNR 171


>Glyma15g40140.1 
          Length = 371

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query: 39  IAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRR 98
           IAPTA+ K A+PEGE           +IM LS  ++ +VEEVAS+   IRF+QLYVYK R
Sbjct: 75  IAPTAFQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDR 134

Query: 99  DISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK 135
           ++ A LV+RAER G+KAI LTVD P LGRREADIKN+
Sbjct: 135 NVVAQLVRRAERAGFKAIALTVDTPILGRREADIKNR 171


>Glyma08g10290.1 
          Length = 370

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 5/124 (4%)

Query: 39  IAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRR 98
           IAPTA  K A+PEGE+          +IM LS  ++ +VEEVAS+   IRF+QLYV+K R
Sbjct: 78  IAPTAMQKMAHPEGELATARAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVFKDR 137

Query: 99  DISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK-AAPHNWDIQVLVSNIKEILLCL 157
           ++ A LV+RAER G+KAI LTVD+P LGRREADIKN+   P N    +++ N++ + L  
Sbjct: 138 NVVAQLVRRAERAGFKAIALTVDSPILGRREADIKNRFTLPPN----LVLKNLEGLDLGK 193

Query: 158 LNRT 161
           L++T
Sbjct: 194 LDKT 197


>Glyma08g10250.2 
          Length = 370

 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 15/169 (8%)

Query: 1   WLLK-------RVIVTPAVYPRLVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGE 53
           W LK       R++  P +   LV+    D+ +T           IAPTA  K A+PEGE
Sbjct: 36  WTLKENRNAFSRILFRPRI---LVDVSKIDLTATVLGFKISMPIMIAPTAMQKMAHPEGE 92

Query: 54  VXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGY 113
           +          +IM LS  ++ +VEEVAS+   IRF+QLYV+K R++ A LV+RAER G+
Sbjct: 93  LATARAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVFKDRNVVAQLVRRAERAGF 152

Query: 114 KAIVLTVDAPRLGRREADIKNK-AAPHNWDIQVLVSNIKEILLCLLNRT 161
           KAI LTVD P LGRREADIKN+   P N    +++ N + + L  L++T
Sbjct: 153 KAIALTVDTPILGRREADIKNRFTLPPN----LVLKNFEGLDLGKLDKT 197


>Glyma08g10250.1 
          Length = 370

 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 15/169 (8%)

Query: 1   WLLK-------RVIVTPAVYPRLVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGE 53
           W LK       R++  P +   LV+    D+ +T           IAPTA  K A+PEGE
Sbjct: 36  WTLKENRNAFSRILFRPRI---LVDVSKIDLTATVLGFKISMPIMIAPTAMQKMAHPEGE 92

Query: 54  VXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGY 113
           +          +IM LS  ++ +VEEVAS+   IRF+QLYV+K R++ A LV+RAER G+
Sbjct: 93  LATARAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVFKDRNVVAQLVRRAERAGF 152

Query: 114 KAIVLTVDAPRLGRREADIKNK-AAPHNWDIQVLVSNIKEILLCLLNRT 161
           KAI LTVD P LGRREADIKN+   P N    +++ N + + L  L++T
Sbjct: 153 KAIALTVDTPILGRREADIKNRFTLPPN----LVLKNFEGLDLGKLDKT 197


>Glyma08g10230.1 
          Length = 407

 Score =  116 bits (291), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 10/142 (7%)

Query: 1   WLLK-------RVIVTPAVYPRLVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGE 53
           W LK       R++  P +   LV+    D+ +T           IAPTA  K A+PEGE
Sbjct: 73  WTLKENQNAFSRILFRPRI---LVDVSKIDLTATVLGFKISMPIMIAPTAMQKMAHPEGE 129

Query: 54  VXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGY 113
           +          +IM LS  ++ +VEEVAS+   IRF+QLYV+K R+++A LV+RAER G+
Sbjct: 130 LATARAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVFKDRNVAAQLVRRAERAGF 189

Query: 114 KAIVLTVDAPRLGRREADIKNK 135
           KAI LTVD P LGRREADIKN+
Sbjct: 190 KAIALTVDTPILGRREADIKNR 211


>Glyma05g27300.1 
          Length = 368

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 6/150 (4%)

Query: 14  PR-LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYM 72
           PR LV+    D+ +T           IAPTA  K A+PEGE+          +IM LS  
Sbjct: 50  PRILVDVSKIDLTTTVLGFKISMPIMIAPTAMQKLAHPEGELATARAASAAGTIMTLSSC 109

Query: 73  SSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADI 132
           +S +VEEVAS+ + IRF+QLYV K R++ A LV+RAER G+KAI LTVD P LG READI
Sbjct: 110 ASSSVEEVASTGSDIRFFQLYVLKDRNVVAQLVRRAERAGFKAIALTVDTPILGHREADI 169

Query: 133 KNK-AAPHNWDIQVLVSNIKEILLCLLNRT 161
           KN+   P N    +++ N + + L  L++T
Sbjct: 170 KNRLTLPLN----LVLKNFEGLDLGKLDKT 195


>Glyma05g27290.1 
          Length = 403

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 5/99 (5%)

Query: 64  NSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAP 123
            +IM LS  ++ +VEEVAS+   IRF+QLYV K R++ A +V+RAE+ G+KAI LTVD+P
Sbjct: 136 GTIMTLSSTATSSVEEVASTGPGIRFFQLYVLKDRNVVAQVVRRAEKAGFKAITLTVDSP 195

Query: 124 RLGRREADIKNK-AAPHNWDIQVLVSNIKEILLCLLNRT 161
            LGRREADIKN+   P N    +++ N + + L  LN+T
Sbjct: 196 ILGRREADIKNRFTLPPN----LVLKNFEGLDLGKLNKT 230


>Glyma15g40140.2 
          Length = 269

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 55/69 (79%)

Query: 67  MILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLG 126
           M LS  ++ +VEEVAS+   IRF+QLYVYK R++ A LV+RAER G+KAI LTVD P LG
Sbjct: 1   MTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPILG 60

Query: 127 RREADIKNK 135
           RREADIKN+
Sbjct: 61  RREADIKNR 69


>Glyma08g10280.1 
          Length = 256

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 28/147 (19%)

Query: 16  LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSC 75
           LV+    D+ +T           IAPTA  K A+PE                  SY S  
Sbjct: 33  LVDLSKIDLTTTVLGFKISMPIMIAPTAKQKMAHPEAS----------------SYSSPR 76

Query: 76  TVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK 135
             +    S N        V K +++ A LV+RAER G++AI LTVD+P LGRREADIKN+
Sbjct: 77  QPKSNVFSFN-------LVLKDKNVVAQLVRRAERAGFQAIALTVDSPVLGRREADIKNR 129

Query: 136 -AAPHNWDIQVLVSNIKEILLCLLNRT 161
              P N    ++  N + + L  L++T
Sbjct: 130 FTLPPN----MVFKNFERLDLGKLDKT 152


>Glyma18g42590.1 
          Length = 263

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 10/72 (13%)

Query: 63  CNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDA 122
            ++IM LS  +  +VEEVAS    I F+QLY          LV+RAER G+KAI  T+D 
Sbjct: 34  ASTIMTLSSWAISSVEEVASIGLDIHFFQLY----------LVRRAERVGFKAIAFTMDI 83

Query: 123 PRLGRREADIKN 134
             LGR E DIKN
Sbjct: 84  DILGRGEVDIKN 95


>Glyma19g23200.1 
          Length = 116

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 100 ISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK 135
           + A LV+RAER G+KAI LTVD  RLGRREADIKN+
Sbjct: 2   VVAQLVRRAERAGFKAIALTVDTLRLGRREADIKNR 37


>Glyma16g12780.1 
          Length = 123

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 3/41 (7%)

Query: 100 ISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNKAAPHN 140
           + A LV+RAER  +KAI LTVD  RLGR+EADIKN+   HN
Sbjct: 1   VVAQLVRRAERARFKAIALTVDTLRLGRKEADIKNR---HN 38