Jatropha Genome Database

JcCB0084921.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084921.20 - phase: 0 
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g05620.1                                                       291   4e-79
Glyma02g14370.1                                                       233   1e-61
Glyma02g14260.1                                                       190   1e-48
Glyma04g22810.1                                                       114   1e-25
Glyma17g22250.1                                                        50   2e-06

>Glyma19g05620.1 
          Length = 406

 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 137/262 (52%), Positives = 187/262 (71%), Gaps = 9/262 (3%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTRPLS+YR+ PS LS  PP+GPYSGYLVITDEE EAE+T C+  C++ +V KLPFPQ
Sbjct: 1   MYVTRPLSMYRRSPSTLSMPPPDGPYSGYLVITDEEAEAEDTCCWRLCRRKKVKKLPFPQ 60

Query: 61  DKILNVVHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMGLL 120
           DKI +V H SE ++T++ K WF+PV    L+SN YYVI+AKGR KG+A +CSR+ D+ + 
Sbjct: 61  DKIFSVTHASEYEQTSSTKVWFLPVPDHPLASNRYYVIRAKGRQKGKAYKCSREADI-VT 119

Query: 121 CCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHSFFAKSLAPYAYPPKLLRNKGWELRI-- 178
           CCF  ++ D RP+P + ++ YQ FKI SH +  FFA+S+ P   PP  LR KGW +R   
Sbjct: 120 CCFTDILNDQRPKPFNLKDLYQIFKIHSHQSGGFFARSITPDGIPPSFLRKKGWRIRTSG 179

Query: 179 SLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEENAR 238
           S RS +  +      ALG+D+  R +LP+F+FPIS + S  VT+G WYCPF+F+++   R
Sbjct: 180 SYRSCKLSE------ALGVDAPLREKLPDFNFPISRKRSPPVTVGRWYCPFIFVRDNGTR 233

Query: 239 IREQMNRSILYRMSLEQYWEEI 260
           ++ QM +S+ Y M+LEQ WEE+
Sbjct: 234 VKHQMKKSMYYSMTLEQRWEEV 255


>Glyma02g14370.1 
          Length = 378

 Score =  233 bits (595), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/263 (47%), Positives = 171/263 (65%), Gaps = 17/263 (6%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTRPLS+Y++ PSA+S+ PP GP SGYLVI D+E +A +   FG  K   +  LPFPQ
Sbjct: 1   MYVTRPLSMYKRNPSAVSD-PPLGPNSGYLVILDKEAQAYS--FFGLFKDRAIRDLPFPQ 57

Query: 61  DKILNVVHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM-GL 119
           +K L++ + S+ +E       FVPVL Q LSSN YYVIK KG+HKGQA   S++ DM   
Sbjct: 58  NKNLSINYGSDGEEDL-----FVPVLNQPLSSNRYYVIKRKGKHKGQASTSSKEEDMETF 112

Query: 120 LCCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHSFFAKSLAPYAYPPKLLRNKGWELRIS 179
           LCC    ++D++PRPLDP + YQ+ +I    N+ F AKS+AP    P LLR KGW +   
Sbjct: 113 LCC--SFVQDVKPRPLDPSDDYQQVEIIKRVNNDFKAKSVAPDGILPGLLRRKGWRVYAH 170

Query: 180 LRSSRKLQPLINHHALGLDSSARTQLPNFD-FPISSQTSSSVTIGTWYCPFMFIKEENAR 238
             +   L       ALG D S R +LP+F+ FP+S+  S SV +G WYCPFMF+KE   +
Sbjct: 171 TPTDYHL-----GEALGSDDSLRAKLPDFNVFPLSNDRSESVDVGKWYCPFMFVKERLMK 225

Query: 239 IREQMNRSILYRMSLEQYWEEIL 261
           ++EQM +++ Y ++L+Q WE+I 
Sbjct: 226 LKEQMKKTVFYELTLKQRWEKIF 248


>Glyma02g14260.1 
          Length = 396

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/270 (41%), Positives = 155/270 (57%), Gaps = 18/270 (6%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTRPLSLY+K   ALS  PPEGP SG LVI DE+     T CFG  +   V +LPFPQ
Sbjct: 1   MYVTRPLSLYKKSADALSLPPPEGPNSGILVIQDEDLVP--TSCFGLGEFHEVKELPFPQ 58

Query: 61  DKILNVVH---LSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
           +  L + +   +S N+ T      F+PVL Q LSSN YYVI   G+ +G+A   S+  D+
Sbjct: 59  NLNLELFYRSGISLNRTTHYHHVAFIPVLNQPLSSNKYYVINLSGKKRGEAYINSKGEDL 118

Query: 118 GLLCCFKKVIKDIRPRPLDPRNTYQEFKI-----SSHYNHSFFAKSLAPYAYPPKLLRNK 172
               CF   + D+   P+   +TYQEF+I        +   F AKS+AP  YPP+ L  +
Sbjct: 119 DTF-CFYNAVSDVPLHPIVINDTYQEFEIFPRRSKVTFRSGFSAKSVAPDGYPPRFLSTR 177

Query: 173 GWELRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFI 232
            W++  S  S   L       A G++ + R   P F F ++ ++S SV +G WYCPFMFI
Sbjct: 178 -WKVSASTSSDSSLG-----EASGVNETLRASKPEFQFSLAKKSSDSVVVGKWYCPFMFI 231

Query: 233 KEENAR-IREQMNRSILYRMSLEQYWEEIL 261
           KE   + ++E+M +S+ Y M+LEQ WE+I 
Sbjct: 232 KEGTHKTLKEEMRKSMFYEMTLEQKWEQIF 261


>Glyma04g22810.1 
          Length = 337

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 126/266 (47%), Gaps = 65/266 (24%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKK-TRVGKLPFP 59
           MYVTRPLSLY+K  + L   PPEGP SG LVI D++ E   T CFG  ++   V +LPFP
Sbjct: 1   MYVTRPLSLYKKSANGLPLPPPEGPNSGILVIQDQDLEP--TSCFGLGEEYHEVKELPFP 58

Query: 60  QDKILNVVH---LSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMD 116
           Q+  L + +   +S N+ T      F+PVL Q L SN YYVI   G+ +G+  +   D  
Sbjct: 59  QNLNLELFYRSGISLNRTTHHHHVAFIPVLNQPLPSNKYYVINLSGKKRGEPSKV--DTL 116

Query: 117 MGLLCCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHSFFAKSLAPYAYPPKLLRNKGWEL 176
            GL                                                   ++ W++
Sbjct: 117 QGL---------------------------------------------------SRRWKV 125

Query: 177 RISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEEN 236
             S  S   L+      A G+  + R   P F F ++ ++S SV +G WYCPFMFIKE  
Sbjct: 126 SASTSSDYSLR-----QASGVSEALRAIKPEFKFSLAKKSSESVVVGKWYCPFMFIKEGT 180

Query: 237 ARI-REQMNRSILYRMSLEQYWEEIL 261
            +  +E+M +S+ Y M+LEQ WE+I 
Sbjct: 181 HKTWKEEMRKSMFYEMTLEQKWEQIF 206


>Glyma17g22250.1 
          Length = 189

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 204 QLPNFD-FPISSQTSSSVTIGTWYCPFMFIKEENARIREQMNRSILYRMS 252
            LP+F+ F +S+     V +G WYCPFMF+KE   ++++QM  ++ Y ++
Sbjct: 63  HLPDFNIFTLSNDRFELVDVGKWYCPFMFVKERLMKLKDQMKNTVFYELT 112