Jatropha Genome Database

JcCB0084921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084921.10 - phase: 1 /pseudo
         (389 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g07130.1                                                       587   e-167
Glyma19g05630.1                                                       229   5e-60
Glyma18g12090.1                                                       102   9e-22
Glyma02g25300.1                                                       101   2e-21
Glyma11g00580.1                                                        69   6e-12

>Glyma13g07130.1 
          Length = 502

 Score =  587 bits (1512), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 272/346 (78%), Positives = 311/346 (89%), Gaps = 2/346 (0%)

Query: 18  RLSNGFRARVKAISNANLKAIEIPEKWYNLIADXXXXXXXXXXXXTFEPVKPEDLAPLFP 77
           RLS+    +V+A   A+ K+I IP +WYN+IAD            T+EP+KP+DL+PLFP
Sbjct: 42  RLSSA--CKVRATLGASDKSIGIPNQWYNVIADLPVKPPPPLHPKTYEPIKPDDLSPLFP 99

Query: 78  DELIKQEATNEKFIDIPEQVLDIYKLWRPTPLIRAKRLEKLLDTPAKIYYKYEGVSPAGS 137
           DELI+QE  +++FIDIP++VLD+YKLWRPTPLIRAKRLEKLLDTPA+IYYKYEGVSPAGS
Sbjct: 100 DELIRQEIASDRFIDIPDEVLDVYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGS 159

Query: 138 HKPNTAVPQVFYNAQQGIKNLVTETGAGQWGCSLAFACSLFGLGCEVWQVRASYDQKPYR 197
           HKPN+AVPQ +YN Q G+KN+VTETGAGQWG +LAFACS+FGLGCEVWQVRASYD KPYR
Sbjct: 160 HKPNSAVPQAWYNLQAGVKNVVTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYR 219

Query: 198 RMMMETWGAKVHPSPSNVTNAGRDILKKDPSTPGSLGIAISEAVEVAATNADTKYCLGSV 257
           R+MM+TWGAKVHPSPS +T AGR +L++DPS+PGSLGIAISEAVEVAA NADTKYCLGSV
Sbjct: 220 RLMMQTWGAKVHPSPSMITEAGRRMLQEDPSSPGSLGIAISEAVEVAAKNADTKYCLGSV 279

Query: 258 LNHVLLHQTIMGEECLKQMEAIGETPDMIIGCTGGGSNFAGLSFPFIREKLNGKINPVIR 317
           LNHVLLHQ+++GEEC+KQMEAIGETPD+IIGCTGGGSNFAGLSFPF+REKLN KINPVIR
Sbjct: 280 LNHVLLHQSVIGEECIKQMEAIGETPDVIIGCTGGGSNFAGLSFPFLREKLNKKINPVIR 339

Query: 318 AVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFIPDPIHAG 363
           AVEPAACPSLTKGVY YDYGDTAGMTPLMKMHTLGHDF+PDPIHAG
Sbjct: 340 AVEPAACPSLTKGVYTYDYGDTAGMTPLMKMHTLGHDFVPDPIHAG 385


>Glyma19g05630.1 
          Length = 241

 Score =  229 bits (583), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 119/131 (90%), Gaps = 3/131 (2%)

Query: 233 LGIAISEAVEVAATNADTKYCLGSVLNHVLLHQTIMGEECLKQMEAIGETPDMIIGCTGG 292
           LGI ISEAVEVAA NA +KYCL    NH+LLH +++GEE +KQMEAIGETPD+I GCTGG
Sbjct: 1   LGITISEAVEVAAKNAYSKYCLH---NHILLHHSVIGEEWIKQMEAIGETPDVIKGCTGG 57

Query: 293 GSNFAGLSFPFIREKLNGKINPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLG 352
           GSNFAGLSFPF+REKLN KINPVIRAVEPAACPSLTKGVY YDYGDTAGMTPL+KMHTLG
Sbjct: 58  GSNFAGLSFPFLREKLNKKINPVIRAVEPAACPSLTKGVYTYDYGDTAGMTPLIKMHTLG 117

Query: 353 HDFIPDPIHAG 363
           HDF+PDPIHAG
Sbjct: 118 HDFVPDPIHAG 128


>Glyma18g12090.1 
          Length = 471

 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 132/302 (43%), Gaps = 45/302 (14%)

Query: 85  ATNEKFIDIPEQVLDIYKLWRPTPLIRAKRLEKLLDTPA----KIYYKYEGVSPAGSHKP 140
           A +E+F      +L  Y + R +PL  A+RL +    P      IY K E ++  G+HK 
Sbjct: 109 AADEEFQTELAGILKDY-VGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 167

Query: 141 NTAVPQVFYNAQQGIKNLVTETGAGQWGCSLAFACSLFGLGCEVWQVRASYDQKPYRRMM 200
           N AV Q     + G K ++ ETGAGQ G + A  C+ FGL C ++      +++      
Sbjct: 168 NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 227

Query: 201 METWGAKVHPSPSNVTNAGRDILKKDPSTPGSLGIAISEAVEVAATNAD-TKYCLGSVLN 259
           M   GA+V P      ++G   LK           A SEA+    TN + T Y LGSV  
Sbjct: 228 MRLLGAEVRP-----VHSGTATLKD----------ATSEAIRDWVTNVETTHYILGSVAG 272

Query: 260 ------HVLLHQTIMGEECLKQ-MEAIGETPDMIIGCTGGGSNFAGLSFPFIREKLNGKI 312
                  V     ++G+E  KQ +E  G  PD++I C GGGSN  GL   F+ +K     
Sbjct: 273 PHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLIACVGGGSNAIGLFNEFVDDK----- 327

Query: 313 NPVIRAVEPAA--------CPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFIPDPIHAGI 364
           +  +  VE A           +LTKG    + G   G    +     G    P  I AG+
Sbjct: 328 DVRLIGVEAAGFGLDSGKHAATLTKG----EVGVLHGAMSYLLQDDDGQIVEPHSISAGL 383

Query: 365 SY 366
            Y
Sbjct: 384 DY 385


>Glyma02g25300.1 
          Length = 479

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 132/302 (43%), Gaps = 45/302 (14%)

Query: 85  ATNEKFIDIPEQVLDIYKLWRPTPLIRAKRLEKLLDTPA----KIYYKYEGVSPAGSHKP 140
           + +E+F      +L  Y + R +PL  A+RL +    P      IY K E ++  G+HK 
Sbjct: 117 SADEEFQKELAGILKDY-VGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 175

Query: 141 NTAVPQVFYNAQQGIKNLVTETGAGQWGCSLAFACSLFGLGCEVWQVRASYDQKPYRRMM 200
           N AV Q     + G K ++ ETGAGQ G + A  C+ FGL C ++      +++      
Sbjct: 176 NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 235

Query: 201 METWGAKVHPSPSNVTNAGRDILKKDPSTPGSLGIAISEAVEVAATNAD-TKYCLGSVLN 259
           M   GA+V P      ++G   LK           A SEA+    TN + T Y LGSV  
Sbjct: 236 MRLLGAEVRP-----VHSGTATLKD----------ATSEAIRDWVTNVETTHYILGSVAG 280

Query: 260 ------HVLLHQTIMGEECLKQ-MEAIGETPDMIIGCTGGGSNFAGLSFPFIREKLNGKI 312
                  V     ++G+E  KQ +E  G  PD++I C GGGSN  GL   F+ +K     
Sbjct: 281 PHPYPMMVREFHAVIGKETRKQALEKWGGKPDILIACVGGGSNAMGLFNEFVDDK----- 335

Query: 313 NPVIRAVEPAA--------CPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFIPDPIHAGI 364
           +  +  VE A           +LTKG    + G   G    +     G    P  I AG+
Sbjct: 336 DVRLIGVEAAGFGLDSGKHAATLTKG----EVGVLHGAMSYLLQDDDGQIVEPHSISAGL 391

Query: 365 SY 366
            Y
Sbjct: 392 DY 393


>Glyma11g00580.1 
          Length = 462

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 31/216 (14%)

Query: 105 RPTPLIRAKRLEKLLDTPAK-----IYYKYEGVSPAGSHKPNTAVPQVFYNAQQGIKNLV 159
           R TPL  AKRL +   +        IY K E ++ +GSHK N A+ Q     + G K++V
Sbjct: 120 RETPLYHAKRLSEYYKSVNNGKGPDIYLKREDLNHSGSHKMNNALAQAMIAKRMGCKSVV 179

Query: 160 TETGAGQWGCSLAFACSLFGLGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTNAG 219
           T TG+GQ G + A AC+   L C V+       ++     +++  GA+V       T+A 
Sbjct: 180 TATGSGQHGLATAAACAKLALDCTVFMADKDIHRQYSNVRLIKLLGAQVEAVDGGFTDAA 239

Query: 220 RDILKKDPSTPGSLGIAISEAVEVAATNADTKYCL-GSVL------NHVLLHQTIMGEEC 272
                             SEA      + + +Y L GS +        V   Q+++G+E 
Sbjct: 240 ------------------SEAFRYWVGDLENRYHLSGSAVGPHPCPTMVREFQSVIGKET 281

Query: 273 -LKQMEAIGETPDMIIGCTGGGSNFAGLSFPFIREK 307
            ++ +E  G  PD+++   G GSN  GL   FI +K
Sbjct: 282 RMQALEKWGGKPDVLVASVGTGSNALGLFHEFIADK 317