Jatropha Genome Database

JcCB0083891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0083891.10 - phase: 0 
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g36610.1                                                       494   e-140
Glyma17g03990.1                                                       493   e-140
Glyma08g47350.1                                                       406   e-113
Glyma18g38790.1                                                       200   1e-51
Glyma15g14800.1                                                       106   3e-23
Glyma08g03240.1                                                        52   6e-07

>Glyma07g36610.1 
          Length = 497

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/288 (84%), Positives = 259/288 (89%)

Query: 1   MDQAISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 60
           MDQAISVMA+ GFAELIDFNPIRATDV+LPAGGTFVIAHSLAESQKAVTAATNYNNRVVE
Sbjct: 210 MDQAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 269

Query: 61  CRLAAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSFAGRHNSSDPVVAVKELLKEEPYTA 120
           CRLA+IVL IKLGM P++AISKV TLSDVEGLCVSFAG HNSSDPV+AVKE LKEEPYTA
Sbjct: 270 CRLASIVLAIKLGMDPKEAISKVNTLSDVEGLCVSFAGIHNSSDPVLAVKEYLKEEPYTA 329

Query: 121 EEIEKITEQDLPXXXXXXXXXLDVLKAATHFKLHQRAAHVYSEAKRVHAFKDTVSSNLSE 180
           EEIE +T + L          L+V+K A  +KLHQRAAHVYSEAKRVHAFKD VSS LS+
Sbjct: 330 EEIEAVTGEKLTSFLNNNAAYLEVVKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSTLSD 389

Query: 181 EDKLKKLGDLMNESHYSCSVLYECSCPELEELVKICREHGALGARLTGAGWGGCAVALVK 240
           ED LKKLGDLMNESH+SCSVLYECSCPELEELV ICR +GALGARLTGAGWGGCAVALVK
Sbjct: 390 EDMLKKLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVK 449

Query: 241 EAIVPQFILNLKENFFQSRIDKGIIGKNDLGLYVFASKPSSGAAIFKF 288
           E+IVPQFILNLKE F+QSRIDKG+I KNDLGLYVFASKPSSGAAIFKF
Sbjct: 450 ESIVPQFILNLKECFYQSRIDKGVIKKNDLGLYVFASKPSSGAAIFKF 497


>Glyma17g03990.1 
          Length = 497

 Score =  493 bits (1269), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/288 (84%), Positives = 259/288 (89%)

Query: 1   MDQAISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 60
           MDQAISVMA+ GFAELIDFNPIRATDV+LPAGGTFVIAHSLAESQKAVTAATNYNNRVVE
Sbjct: 210 MDQAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 269

Query: 61  CRLAAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSFAGRHNSSDPVVAVKELLKEEPYTA 120
           C LA+IVL IKLGM P++AISKV TLSDVEGLCVSFAG +NSSDPV+AVKE LKEEPYTA
Sbjct: 270 CHLASIVLAIKLGMDPKEAISKVSTLSDVEGLCVSFAGIYNSSDPVLAVKEYLKEEPYTA 329

Query: 121 EEIEKITEQDLPXXXXXXXXXLDVLKAATHFKLHQRAAHVYSEAKRVHAFKDTVSSNLSE 180
           EEIE +T + L          L+VLK A  +KLHQRAAHVYSEAKRVHAFKD VSSNLS+
Sbjct: 330 EEIEAVTGEKLTSFLNNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSNLSD 389

Query: 181 EDKLKKLGDLMNESHYSCSVLYECSCPELEELVKICREHGALGARLTGAGWGGCAVALVK 240
           ED LKKLGDLMNESH+SCSVLYECSCPELEELV ICR +GALGARLTGAGWGGCAVALVK
Sbjct: 390 EDMLKKLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVK 449

Query: 241 EAIVPQFILNLKENFFQSRIDKGIIGKNDLGLYVFASKPSSGAAIFKF 288
           E+IVPQFILNLKE F+QSRIDKG+I KNDLGLYVFASKPSSGAAIFKF
Sbjct: 450 ESIVPQFILNLKECFYQSRIDKGVIKKNDLGLYVFASKPSSGAAIFKF 497


>Glyma08g47350.1 
          Length = 427

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/295 (69%), Positives = 231/295 (78%), Gaps = 17/295 (5%)

Query: 1   MDQAISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 60
           MDQAISVMA+ G A+LIDFNPI     +LPAGGTFVIAHSLAESQKAVTAATNYNNR  E
Sbjct: 135 MDQAISVMAKTGCADLIDFNPICT---QLPAGGTFVIAHSLAESQKAVTAATNYNNRAFE 191

Query: 61  CRLAAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSFAGRHNSSDPVVAVKELLKEEPYTA 120
           C L +IVLGIKLGMKP++ I  +KTLSDVEGLC+SFA  H SSDPV+A+KE LKEEPYTA
Sbjct: 192 CHLPSIVLGIKLGMKPREEILNLKTLSDVEGLCLSFASVHKSSDPVLAIKEFLKEEPYTA 251

Query: 121 EEIEKITEQDLPXXXXXXXXXLDVLKAATHFKLHQRAAHVYSEAKRVHAFKDTVSSNLS- 179
           EEIEKI +++L          L+V+KAA H+KLHQRA HVYSEA+RV AFKD  + N   
Sbjct: 252 EEIEKIIDENLTSIFSNNPIYLNVIKAAEHYKLHQRATHVYSEARRVLAFKDIYNPNQCL 311

Query: 180 -------------EEDKLKKLGDLMNESHYSCSVLYECSCPELEELVKICREHGALGARL 226
                         E+ LKKLGDL+NESHYSCSVLYECSC ELEELV ICR++GA+GARL
Sbjct: 312 LFHVVRNLIFFGVSEEMLKKLGDLLNESHYSCSVLYECSCSELEELVNICRKNGAIGARL 371

Query: 227 TGAGWGGCAVALVKEAIVPQFILNLKENFFQSRIDKGIIGKNDLGLYVFASKPSS 281
           TGAGWGGC VALVKE I  QFIL+LKE F+Q R+DKG I KNDL LYVFASKPSS
Sbjct: 372 TGAGWGGCVVALVKECIASQFILDLKERFYQFRVDKGDISKNDLDLYVFASKPSS 426


>Glyma18g38790.1 
          Length = 148

 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/152 (66%), Positives = 119/152 (78%), Gaps = 4/152 (2%)

Query: 4   AISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRL 63
           AI VMA+   AELIDF+PI  TDV+LPAGGTFVIAHSLAESQ+ VTAA NYNNRV EC L
Sbjct: 1   AIFVMAKTKCAELIDFSPICTTDVQLPAGGTFVIAHSLAESQRVVTAAKNYNNRVFECHL 60

Query: 64  AAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSFAGRHNSSDPVVAVKELLKEEPYTAEEI 123
           A+IVLGIKLGMKP++AI  +KT+SDVEGLC+SFA  H SSDPV+A+    KEEP TAEEI
Sbjct: 61  ASIVLGIKLGMKPREAIVNIKTISDVEGLCLSFASIHKSSDPVLAI----KEEPCTAEEI 116

Query: 124 EKITEQDLPXXXXXXXXXLDVLKAATHFKLHQ 155
           EKIT++ L          L+ +KA+ H+KLHQ
Sbjct: 117 EKITDEKLTSIFSNNTIYLNAIKASEHYKLHQ 148


>Glyma15g14800.1 
          Length = 63

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/63 (77%), Positives = 57/63 (90%)

Query: 3  QAISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECR 62
          QAISVM +A FAELIDFNPI ATDV LP GGT+VIAHSLAE++KAVT+ATNYNNRV++C 
Sbjct: 1  QAISVMGKAEFAELIDFNPIHATDVDLPVGGTYVIAHSLAETEKAVTSATNYNNRVLDCN 60

Query: 63 LAA 65
          LA+
Sbjct: 61 LAS 63


>Glyma08g03240.1 
          Length = 431

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 79/205 (38%), Gaps = 59/205 (28%)

Query: 37  IAHSLAESQKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSF 96
           I  +L+  ++A+T    YN RVVECR AA +L     ++     +    LS+V       
Sbjct: 241 ILLALSGLKQALTNNPGYNKRVVECREAAQIL-----LEASGDYTTEPILSNV------- 288

Query: 97  AGRHNSSDPVVAVKELLKEEPYTAEEIEKITEQDLPXXXXXXXXXLDVLKAATHFKLHQR 156
                  DP V      K EP                                   L +R
Sbjct: 289 -------DPEVYDTHKHKLEP----------------------------------NLAKR 307

Query: 157 AAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNESHYSCSVLYECSCPELEELVKIC 216
           A H +SE  RV    +  +        LK  G L+  S  S    YEC C  L +L +I 
Sbjct: 308 AEHYFSENMRVMKGVEAWAMG-----NLKDFGMLITASGRSSIQNYECGCEPLIQLYEIL 362

Query: 217 -REHGALGARLTGAGWGGCAVALVK 240
            R  G LGAR +GAG+ GC +A V+
Sbjct: 363 LRAPGVLGARFSGAGFRGCCLAFVE 387