Jatropha Genome Database

JcCB0083701.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0083701.20 - phase: 2 /pseudo/partial
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53370.1                                                       128   3e-30
Glyma08g48120.1                                                       124   4e-29
Glyma13g07660.1                                                       115   2e-26
Glyma19g06740.1                                                        86   1e-17
Glyma10g12720.1                                                        86   2e-17
Glyma10g22050.1                                                        67   1e-11
Glyma02g33880.1                                                        60   1e-09

>Glyma18g53370.1 
          Length = 421

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 79/143 (55%), Gaps = 53/143 (37%)

Query: 83  AYLYGECIECMATSDNVVRAGLTPKHRDIQTLCSMLTYKQA------------------- 123
           AYL GEC+ECMATSDNVVRAGLTPKHRD+QTLCSMLTYKQ                    
Sbjct: 277 AYLSGECVECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILRGVSVNPYVNKYTP 336

Query: 124 ---------------------------------GEGRMYTQLSK-DVVTEGDVLFAPANT 149
                                            GEG M T L K  VVTEGDVLFA ANT
Sbjct: 337 PFEEFEIDRCILPQGETVVFPAVPGPSIFLVTVGEGTMNTGLPKGHVVTEGDVLFAAANT 396

Query: 150 EVTITTTSELCLYRAGVNSRFFQ 172
           E+++T+ SEL LYR GVNS+FFQ
Sbjct: 397 EISVTSASELNLYRTGVNSKFFQ 419


>Glyma08g48120.1 
          Length = 421

 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/143 (49%), Positives = 77/143 (53%), Gaps = 53/143 (37%)

Query: 83  AYLYGECIECMATSDNVVRAGLTPKHRDIQTLCSMLTYKQA------------------- 123
           AYL GEC+ECMATSDNVVRAGLTPKHRD+QTLCSMLTYKQ                    
Sbjct: 277 AYLSGECVECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILHGVSVNPYVNKYTP 336

Query: 124 ---------------------------------GEGRMYTQLSK-DVVTEGDVLFAPANT 149
                                            GEG M T   K  VVTEGDVLFA ANT
Sbjct: 337 PFEEFEIDRCILPQGETVVFPAVPGPSIFLVTVGEGTMNTGSPKGHVVTEGDVLFAAANT 396

Query: 150 EVTITTTSELCLYRAGVNSRFFQ 172
           E+ +T+ SEL LYR GVNS+FFQ
Sbjct: 397 EIRVTSASELHLYRTGVNSKFFQ 419


>Glyma13g07660.1 
          Length = 449

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 75/143 (52%), Gaps = 53/143 (37%)

Query: 83  AYLYGECIECMATSDNVVRAGLTPKHRDIQTLCSMLTYKQA------------------- 123
           AY+ GECIECMATSDNVVRAGLTPKHRD+QTLCSMLTYKQ                    
Sbjct: 305 AYICGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILRGVPINQYVNKYIP 364

Query: 124 ---------------------------------GEGRMYTQLSKDV-VTEGDVLFAPANT 149
                                            GEG M T+  K   +TEG VLF  ANT
Sbjct: 365 PFEEFEIDCCILPQGEKVVFPAVPGPSIFLVTVGEGMMTTESPKGYPITEGHVLFVAANT 424

Query: 150 EVTITTTSELCLYRAGVNSRFFQ 172
           E+T+++  +L L+R GVNSRFFQ
Sbjct: 425 EITVSSAPQLHLFRTGVNSRFFQ 447


>Glyma19g06740.1 
          Length = 273

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 33/138 (23%)

Query: 18  INVPEIVELVGSADASRVLLLNEQDAKEVSK----------------------------I 49
           + VPE+VELVG  + + VL + ++D +E  K                            +
Sbjct: 136 LTVPEVVELVGVENVNLVLQITDEDGEEKVKAILQSLFTDVMSESKESVTGAVDKLRNRL 195

Query: 50  NSEINFYPTHVS*-----QRHDN*SNNEIENPITYGKPAYLYGECIECMATSDNVVRAGL 104
           + E   YP+ V         H   + +E          AY+YGECI C ATSDNVVRAGL
Sbjct: 196 HKESQQYPSDVGVIAAFFLNHVKLAPDEALFLGANEPHAYIYGECIACKATSDNVVRAGL 255

Query: 105 TPKHRDIQTLCSMLTYKQ 122
           TPKHRD+QTLCSMLTYKQ
Sbjct: 256 TPKHRDVQTLCSMLTYKQ 273


>Glyma10g12720.1 
          Length = 180

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 83  AYLYGECIECMATSDNVVRAGLTPKHRDIQTLCSMLTYKQAGEGRMYTQLSKDVVTEGDV 142
           AY+ GECIECMATSDNVVRAGLTPKHRD+Q+LCSMLTYKQ      Y  +   V   G  
Sbjct: 87  AYICGECIECMATSDNVVRAGLTPKHRDVQSLCSMLTYKQFCNRENYLSIMVKVSNRGGK 146

Query: 143 L--FAP 146
           L  F+P
Sbjct: 147 LQMFSP 152


>Glyma10g22050.1 
          Length = 79

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 83  AYLYGECIECMATSDNVVRAGLTPKHRDIQTL 114
           AY+ GECIECMATSDNVVRAGLTPKHRD+Q+L
Sbjct: 47  AYICGECIECMATSDNVVRAGLTPKHRDVQSL 78


>Glyma02g33880.1 
          Length = 95

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 31/41 (75%), Gaps = 9/41 (21%)

Query: 83  AYLYGECIE---------CMATSDNVVRAGLTPKHRDIQTL 114
           AY+ GECIE         CMATSDNVVRAGLTPKHRD+QTL
Sbjct: 54  AYICGECIEFYENWDATECMATSDNVVRAGLTPKHRDVQTL 94