Jatropha Genome Database

JcCB0080851.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0080851.20 - phase: 1 /partial
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g14980.1                                                       142   1e-34
Glyma08g14980.2                                                       142   1e-34
Glyma05g31730.1                                                       140   4e-34
Glyma05g31730.2                                                       139   6e-34
Glyma04g39700.2                                                       125   1e-29
Glyma04g39700.3                                                       124   2e-29
Glyma04g39700.1                                                       124   2e-29
Glyma06g15160.1                                                        99   8e-22
Glyma04g39710.1                                                        82   1e-16
Glyma02g08050.3                                                        61   2e-10
Glyma02g08050.1                                                        61   3e-10
Glyma16g27060.2                                                        58   3e-09
Glyma16g27060.1                                                        58   3e-09
Glyma02g08050.2                                                        57   5e-09

>Glyma08g14980.1 
          Length = 295

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 78/92 (84%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S+LESGS+    DE LILK++SQE+ PY+NGRCIYLVGMMGSGKTTVGK++SQVL YSFC
Sbjct: 67  SILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFC 126

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+EEEV G SVA+IFK +GE +FRNKE 
Sbjct: 127 DSDALVEEEVGGNSVADIFKQHGETFFRNKET 158


>Glyma08g14980.2 
          Length = 234

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 78/91 (85%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S+LESGS+    DE LILK++SQE+ PY+NGRCIYLVGMMGSGKTTVGK++SQVL YSFC
Sbjct: 67  SILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFC 126

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKE 91
           D D L+EEEV G SVA+IFK +GE +FRNKE
Sbjct: 127 DSDALVEEEVGGNSVADIFKQHGETFFRNKE 157


>Glyma05g31730.1 
          Length = 298

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 65/92 (70%), Positives = 77/92 (83%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S+LESGS+    DE LILK++SQE  PY+NGRCIYLVGMMGSGKTTVGK++SQVL YSFC
Sbjct: 68  SILESGSVHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFC 127

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+EEEV G SVA+IF+ +GE +FRNKE 
Sbjct: 128 DSDALVEEEVGGNSVADIFEQHGETFFRNKET 159


>Glyma05g31730.2 
          Length = 296

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 65/92 (70%), Positives = 77/92 (83%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S+LESGS+    DE LILK++SQE  PY+NGRCIYLVGMMGSGKTTVGK++SQVL YSFC
Sbjct: 68  SILESGSVHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFC 127

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+EEEV G SVA+IF+ +GE +FRNKE 
Sbjct: 128 DSDALVEEEVGGNSVADIFEQHGETFFRNKET 159


>Glyma04g39700.2 
          Length = 272

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 72/92 (78%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S LE GS   S +E LILK KSQE+ PY++GRCIYLVGMM SGKTTVG++LS+ L+YSF 
Sbjct: 75  SALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMASGKTTVGRILSEALSYSFY 134

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+ +EV GISV +IFK YGE +FRNKE 
Sbjct: 135 DSDALVVKEVGGISVTDIFKHYGEPFFRNKET 166


>Glyma04g39700.3 
          Length = 299

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 72/92 (78%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S LE GS   S +E LILK KSQE+ PY++GRCIYLVGMM SGKTTVG++LS+ L+YSF 
Sbjct: 75  SALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMASGKTTVGRILSEALSYSFY 134

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+ +EV GISV +IFK YGE +FRNKE 
Sbjct: 135 DSDALVVKEVGGISVTDIFKHYGEPFFRNKET 166


>Glyma04g39700.1 
          Length = 305

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 72/92 (78%)

Query: 1   SVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFC 60
           S LE GS   S +E LILK KSQE+ PY++GRCIYLVGMM SGKTTVG++LS+ L+YSF 
Sbjct: 75  SALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMASGKTTVGRILSEALSYSFY 134

Query: 61  DCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
           D D L+ +EV GISV +IFK YGE +FRNKE 
Sbjct: 135 DSDALVVKEVGGISVTDIFKHYGEPFFRNKET 166


>Glyma06g15160.1 
          Length = 214

 Score = 99.4 bits (246), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 3/79 (3%)

Query: 21 KSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCDCDTLIEEEVQGISVAEIFK 80
          KSQE+ PY+NG CIYLVGMMGSGKTTVGK+LSQVL+Y F D D L+  EV G SVA+IFK
Sbjct: 2  KSQEIEPYLNGGCIYLVGMMGSGKTTVGKILSQVLSYLFFDSDALV--EVDGTSVADIFK 59

Query: 81 LYGEGYFRNK-EVIDENSL 98
            GE +F NK EV+   S+
Sbjct: 60 HIGEPFFGNKTEVLRRLSM 78


>Glyma04g39710.1 
          Length = 187

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 44/54 (81%)

Query: 39 MMGSGKTTVGKVLSQVLAYSFCDCDTLIEEEVQGISVAEIFKLYGEGYFRNKEV 92
          MMGSGKTTVGK+LSQVL+Y F D D L+EEEV G +VA+IFK  GE +FRNKE 
Sbjct: 1  MMGSGKTTVGKILSQVLSYLFFDSDALVEEEVDGTAVADIFKHNGEPFFRNKET 54


>Glyma02g08050.3 
          Length = 278

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%)

Query: 11  SSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCDCDTLIEEEV 70
           ++D SL +K K+ EV   + G  I+LVG+  S KT++GK+L+  L Y + D D+L+EE V
Sbjct: 60  ATDSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAV 119

Query: 71  QGISVAEIFKLYGEGYFRNKEV 92
            G   A+ F+   E  F   E 
Sbjct: 120 GGALAAKSFRESDEKGFYESET 141


>Glyma02g08050.1 
          Length = 280

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%)

Query: 11  SSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCDCDTLIEEEV 70
           ++D SL +K K+ EV   + G  I+LVG+  S KT++GK+L+  L Y + D D+L+EE V
Sbjct: 60  ATDSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAV 119

Query: 71  QGISVAEIFKLYGEGYFRNKEV 92
            G   A+ F+   E  F   E 
Sbjct: 120 GGALAAKSFRESDEKGFYESET 141


>Glyma16g27060.2 
          Length = 289

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 6   GSLPVS----SDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCD 61
           G++P S       SL +K K+ EV   + G  I+LVG+  S KT++GK+L+  L Y + D
Sbjct: 62  GTVPSSVGATDSSSLAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFD 121

Query: 62  CDTLIEEEVQGISVAEIFKLYGEGYF 87
            D L+EE V G   A+ F+   E  F
Sbjct: 122 SDNLVEEAVGGALAAKSFRESDEKGF 147


>Glyma16g27060.1 
          Length = 291

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 6   GSLPVS----SDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCD 61
           G++P S       SL +K K+ EV   + G  I+LVG+  S KT++GK+L+  L Y + D
Sbjct: 62  GTVPSSVGATDSSSLAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFD 121

Query: 62  CDTLIEEEVQGISVAEIFKLYGEGYF 87
            D L+EE V G   A+ F+   E  F
Sbjct: 122 SDNLVEEAVGGALAAKSFRESDEKGF 147


>Glyma02g08050.2 
          Length = 277

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 11  SSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKVLSQVLAYSFCDCDTLIEEEV 70
           ++D SL +K K+ EV   + G  I+LVG+  S KT++GK+L+  L Y + D D+L+EE V
Sbjct: 60  ATDSSLAVK-KAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAV 118

Query: 71  QGISVAEIFKLYGEGYFRNKEV 92
            G   A+ F+   E  F   E 
Sbjct: 119 GGALAAKSFRESDEKGFYESET 140