Jatropha Genome Database

JcCB0080131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0080131.10 + phase: 0 /partial
         (210 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43750.1                                                       276   1e-74
Glyma03g41110.1                                                       270   1e-72

>Glyma19g43750.1 
          Length = 303

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 139/198 (70%), Positives = 162/198 (81%)

Query: 13  NKRLVCVXXXXXXXXXPDSDLNPYEVLGVSPFEGFDKVKAAYTKKLKEAESIGDEVTASL 72
           +++++C          PD + NPYEVLGVSP E FD VKAAY KK KEAE  GDE TAS 
Sbjct: 62  DRKIICAAASAAGSSNPDGEFNPYEVLGVSPIEKFDMVKAAYAKKKKEAEMNGDEATASR 121

Query: 73  LEKAYDKLMMSQLTSRKKGVAYGSFKVSKDIKYADKQPIVPWGPRFAKSSIQDMRINLAI 132
           LEKAYDKLMM+QL++RKKGV +GSFKVSK+IKYADK P++PWGPRF KSS  DMRINLAI
Sbjct: 122 LEKAYDKLMMAQLSNRKKGVTFGSFKVSKEIKYADKLPVIPWGPRFTKSSQNDMRINLAI 181

Query: 133 SGAFIAWILIKRNADYKPLQFLAFAFVYRIFEKLKSFEPPVSPTFTEDGEDDGRALRMGK 192
           S  F AWIL+KR+A+YKPLQFLAFAFVYR+FEKLK+FE PV+P + E+GED G  LRMGK
Sbjct: 182 SAVFTAWILVKRSAEYKPLQFLAFAFVYRLFEKLKTFESPVTPKYNEEGEDTGEGLRMGK 241

Query: 193 RLLRSLALVFGCIAFASL 210
           RLLRSLALVFGC+A +SL
Sbjct: 242 RLLRSLALVFGCVAISSL 259


>Glyma03g41110.1 
          Length = 282

 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/198 (69%), Positives = 160/198 (80%)

Query: 13  NKRLVCVXXXXXXXXXPDSDLNPYEVLGVSPFEGFDKVKAAYTKKLKEAESIGDEVTASL 72
           +++++C          PD + NPYEVLGVSP E FD VKAAY KK KEAE  GDE TAS 
Sbjct: 41  DRKIICAAASAAGSSNPDGEFNPYEVLGVSPIEKFDMVKAAYAKKKKEAEMNGDEATASR 100

Query: 73  LEKAYDKLMMSQLTSRKKGVAYGSFKVSKDIKYADKQPIVPWGPRFAKSSIQDMRINLAI 132
           LEKAYDKLMM+QL++RKKGV +GSFKVSK+IKYADK P++PWGPR  KSS  DMRINLAI
Sbjct: 101 LEKAYDKLMMAQLSNRKKGVTFGSFKVSKEIKYADKLPVIPWGPRLTKSSQNDMRINLAI 160

Query: 133 SGAFIAWILIKRNADYKPLQFLAFAFVYRIFEKLKSFEPPVSPTFTEDGEDDGRALRMGK 192
           S  F AWIL+KR+A+YKPLQFLAFAFVYR+FEKLK+ E PV+P + E+GED G  LRMGK
Sbjct: 161 SAVFTAWILVKRSAEYKPLQFLAFAFVYRLFEKLKASESPVTPKYNEEGEDTGEGLRMGK 220

Query: 193 RLLRSLALVFGCIAFASL 210
           RLLRSLALVFGC+A +SL
Sbjct: 221 RLLRSLALVFGCVAISSL 238