Jatropha Genome Database

JcCB0080001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0080001.10 - phase: 0 
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g04220.1                                                       184   1e-46
Glyma04g04050.1                                                       177   1e-44
Glyma17g36140.1                                                       160   1e-39
Glyma14g09030.1                                                       135   6e-32

>Glyma06g04220.1 
          Length = 295

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/276 (43%), Positives = 146/276 (52%), Gaps = 22/276 (7%)

Query: 34  HEFSFTISLHPSSTPVISDXXXXXXXXXXXXIDLSPADDIFFHGXXXXXXXXXXXXXXXX 93
           HEFSFTISLH +S   I D            +DLSPADDIFFHG                
Sbjct: 36  HEFSFTISLHSTSNTTIQDKSKTPPSLA---VDLSPADDIFFHGHLLPLHLLSHFSSSPR 92

Query: 94  XXINSLDSFTLPIKELLDDHQEANRINSSSSNTSQEXXXXXXXXXXXXXXXXXXDREATK 153
              NS+DSFTLPI+E L+D +          N+S                    +   TK
Sbjct: 93  FSTNSVDSFTLPIREFLEDEKR---------NSSNRSNITIDSITSCNNKDDYYNNRVTK 143

Query: 154 TKSKPK-SFSLFGWRKG-----FXXXXXXXXXXXXXXXXXTFEVSHILKRYVRKVRPLLF 207
            +SK K SFSLFG  KG                        ++V H LK+Y+R V+PL+ 
Sbjct: 144 EESKSKPSFSLFGLSKGRKGCQVRDNKEDKEDNIKHKKKLGYDVMHALKKYLRMVQPLVL 203

Query: 208 FKGRREDHHLQLHRQSHSFSGNLSLRNKLELGRGRRGEYSAPASMRTSPTNSGLLVATAT 267
           F+GRRE    + H Q++S SGNL  +NK E+ RGRRGEYSAPASMRTSPTNSGLL+AT  
Sbjct: 204 FRGRREKG--RFHGQAYSHSGNLIRKNKPEV-RGRRGEYSAPASMRTSPTNSGLLLATTA 260

Query: 268 LPSSTSDSTMEELXXXXXXXXXHCKNSIAAEDKIKC 303
           LP + +DSTMEEL         HCKNSIA E+K+ C
Sbjct: 261 LPPA-NDSTMEELQAAIQAAIAHCKNSIAKEEKLSC 295


>Glyma04g04050.1 
          Length = 296

 Score =  177 bits (448), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/276 (44%), Positives = 152/276 (55%), Gaps = 22/276 (7%)

Query: 34  HEFSFTISLHPSSTPVISDXXXXXXXXXXXXIDLSPADDIFFHGXXXXXXXXXXXXXXXX 93
           HEFSFTISLH S+T +               +DLSPADDIFFHG                
Sbjct: 37  HEFSFTISLHSSNTTI----HDKSKTPPSLEVDLSPADDIFFHGHLLPLHLLSHFSSSPR 92

Query: 94  XXINSLDSFTLPIKELLDDHQEANRINSSSSNTSQEXXXXXXXXXXXXXXXXXXDREATK 153
              NS+DSFTLPI+E L+D +  +  + +SSN + +                  +   TK
Sbjct: 93  FSTNSVDSFTLPIREFLEDEKRNSCNSCNSSNITIDSITNSNNIEDH-------NNRVTK 145

Query: 154 --TKSKPKSFSLFGWRKGFXXXXXXXXXXXXX----XXXXTFEVSHILKRYVRKVRPLLF 207
             +KSKP SFSLFG  KG                       ++V H LK+Y+R V+PL+ 
Sbjct: 146 EGSKSKP-SFSLFGLSKGRKGCQVRDKEDKEDNIKHKKKLGYDVMHALKKYLRMVQPLVL 204

Query: 208 FKGRREDHHLQLHRQSHSFSGNLSLRNKLELGRGRRGEYSAPASMRTSPTNSGLLVATAT 267
           F GRRE    + H Q++S SGNL  +NK EL RGRRGEYSAPASMRTSPTNSGLL+ATA 
Sbjct: 205 FGGRREKG--RFHGQAYSHSGNLIRKNKPEL-RGRRGEYSAPASMRTSPTNSGLLLATAA 261

Query: 268 LPSSTSDSTMEELXXXXXXXXXHCKNSIAAEDKIKC 303
           LP + +DSTMEEL         HCKNSIA E+K+ C
Sbjct: 262 LPPA-NDSTMEELQAAIQAAIAHCKNSIAKEEKLSC 296


>Glyma17g36140.1 
          Length = 320

 Score =  160 bits (406), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/273 (41%), Positives = 141/273 (51%), Gaps = 18/273 (6%)

Query: 35  EFSFTISLHPSSTPVISDXXXXXXXXXXXXIDLSPADDIFFHGXXXXXXXXXXXXXXXX- 93
           EFSFTISLH  ST   SD            +DLSPADDIFFHG                 
Sbjct: 62  EFSFTISLH-HSTLFPSDNSKNPPNSSSLALDLSPADDIFFHGHLLPLQLLSHLPSSPPR 120

Query: 94  XXINSLDSFTLPIKELLDDHQEANRINSSSSNTSQEXXXXXXXXXXXXXXXXXXDRE-AT 152
              NS+DSF LPI+ELL+D       N S  +TS                    +     
Sbjct: 121 SSTNSMDSFPLPIRELLEDE------NHSIKDTSGSSNNSTSDSNNSSKRDQDNNNNIGK 174

Query: 153 KTKSKPK-SFSLFGWRKGFXXXXXXXXXXXXXXXXXTFEVSHILKRYVRKVRPLLFFKGR 211
           K + K K SFSLFG  KG                   F+V H +K+Y+R V+P + FKG+
Sbjct: 175 KVQGKSKFSFSLFGLTKGHKGYQDKEDKVKHKNKVR-FDVIHAIKKYLRMVQPRMLFKGQ 233

Query: 212 REDHHLQLHRQSHSFSGNLSLRN-KLELGRGRRGEYSAPASMRTSPTNSGLLVATATLPS 270
           RE   ++   Q +S+SGN++ +N KL+     RG+YSAPASMRTSPTNSGLL+AT  LP 
Sbjct: 234 REK--IRPRGQCYSYSGNVTPKNYKLQ---DWRGQYSAPASMRTSPTNSGLLIATTPLPP 288

Query: 271 STSDSTMEELXXXXXXXXXHCKNSIAAEDKIKC 303
           + SDSTMEEL         HCKNSIA E+ +KC
Sbjct: 289 A-SDSTMEELQAAIQAAIAHCKNSIAKEENLKC 320


>Glyma14g09030.1 
          Length = 272

 Score =  135 bits (340), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 125/240 (52%), Gaps = 12/240 (5%)

Query: 34  HEFSFTISLHPSSTPVISDXXXXXXXXXXXXIDLSPADDIFFHGXXXXXXXXXXXXXXXX 93
            EFSFTISLH S+ P  SD            +DLSPADDIFFHG                
Sbjct: 42  QEFSFTISLHHSTFP--SDNSKAPPNSSSLALDLSPADDIFFHGHLLPLQLLSHLPSSPP 99

Query: 94  -XXINSLDSFTLPIKELLDDHQEANRINSSSSNTSQEXXXXXXXXXXXXXXXXXXDREAT 152
               NS+DSFTLPI+ELL+D  E++ I  SS ++                       +  
Sbjct: 100 RSSTNSMDSFTLPIRELLED--ESHSIKDSSGSSRSSTSDSNNSSKRDQDNNNNNIGKKV 157

Query: 153 KTKSKPKSFSLFGWRKGFXXXXXXXXXXXXXXXXXTFEVSHILKRYVRKVRPLLFFKGRR 212
           + KSK  +FSLFG  KG                   F+V H +K+Y+R V+P + FKG+R
Sbjct: 158 QGKSK-FAFSLFGLTKGHKGYQDKEDKVKHKKKVR-FDVIHAIKKYLRMVQPRMLFKGQR 215

Query: 213 EDHHLQLHRQSHSFSGNLSLRNKLELGRGRRGEYSAPASMRTSPTNSGLLVATATLPSST 272
           E   ++   Q +S+SGN++ RN     +G RG+YSAPASM TSPTNSGLL+AT  LP ++
Sbjct: 216 EK--IRPRGQCYSYSGNVTPRN---YKQGWRGQYSAPASMTTSPTNSGLLIATTPLPPAS 270