Jatropha Genome Database

JcCB0078661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0078661.10 - phase: 0 
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g01170.1                                                       194   4e-50
Glyma04g01170.3                                                       194   4e-50
Glyma06g01210.1                                                       188   3e-48
Glyma06g25880.2                                                        72   4e-13
Glyma06g25880.1                                                        72   4e-13
Glyma15g12230.1                                                        59   2e-09
Glyma15g12230.2                                                        59   3e-09
Glyma09g01380.1                                                        59   3e-09
Glyma07g39620.1                                                        49   3e-06
Glyma07g39620.2                                                        49   3e-06

>Glyma04g01170.1 
          Length = 303

 Score =  194 bits (494), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 86/115 (74%), Positives = 104/115 (90%)

Query: 77  TAADLDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILEN 136
           T  +L+RFA+V NK+ADA+GEVIRKYFRK F+++ K D SPVTIAD++AEE+M+SIIL+N
Sbjct: 28  TPLELNRFAEVGNKVADAAGEVIRKYFRKNFDVIHKHDLSPVTIADQSAEEAMVSIILDN 87

Query: 137 FPSHAIYGEENGWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIALLHQGKPV 191
           FPSHAIYGEENGWRC+EK +DYVWVLDPIDGTKSFITGKP+FGTL+ALL  G P+
Sbjct: 88  FPSHAIYGEENGWRCEEKNADYVWVLDPIDGTKSFITGKPVFGTLVALLQNGTPI 142


>Glyma04g01170.3 
          Length = 295

 Score =  194 bits (494), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 86/115 (74%), Positives = 104/115 (90%)

Query: 77  TAADLDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILEN 136
           T  +L+RFA+V NK+ADA+GEVIRKYFRK F+++ K D SPVTIAD++AEE+M+SIIL+N
Sbjct: 28  TPLELNRFAEVGNKVADAAGEVIRKYFRKNFDVIHKHDLSPVTIADQSAEEAMVSIILDN 87

Query: 137 FPSHAIYGEENGWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIALLHQGKPV 191
           FPSHAIYGEENGWRC+EK +DYVWVLDPIDGTKSFITGKP+FGTL+ALL  G P+
Sbjct: 88  FPSHAIYGEENGWRCEEKNADYVWVLDPIDGTKSFITGKPVFGTLVALLQNGTPI 142


>Glyma06g01210.1 
          Length = 273

 Score =  188 bits (478), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 82/112 (73%), Positives = 102/112 (91%)

Query: 80  DLDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPS 139
           +L+ FA+V NK+ADA+GE+IRKYFRK F+++ K D SPVTIAD++AEE+M+SIIL++FPS
Sbjct: 9   ELNHFAEVGNKVADAAGEIIRKYFRKNFDVIHKHDLSPVTIADQSAEEAMVSIILDSFPS 68

Query: 140 HAIYGEENGWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIALLHQGKPV 191
           HAIYGEENGWRCKEK +DYVWVLDPIDGTKSFITGKP+FG+L+ALL  G P+
Sbjct: 69  HAIYGEENGWRCKEKNTDYVWVLDPIDGTKSFITGKPVFGSLVALLQNGTPI 120


>Glyma06g25880.2 
          Length = 306

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 56  TSTMTSNSKLSDHSDILPSVLTA-ADLDRFADVANKLADASGEVIRKYFRKKFEILDKDD 114
           T  + +NS LSD    + S+ T         +V    A    +V+ +   K   I  K  
Sbjct: 46  TQPLITNSLLSDKFPTVGSLSTGPIPSTHLIEVVKTAAQTGAQVVMEAVNKPRNITYKGL 105

Query: 115 SSPVTIADKAAEESMISIILENFPSHAIYGEENGWRCKEKFSDYVWVLDPIDGTKSFITG 174
           +  VT  DK +E +++ ++ +NF  H I GEE G    +  SDY+W +DP+DGT +F  G
Sbjct: 106 TDLVTETDKMSEAAILEVVKKNFEDHLILGEEGG-VIGDAASDYLWCIDPLDGTTNFAHG 164

Query: 175 KPLFGTLIALLHQGKP 190
            P F   + +L++G P
Sbjct: 165 YPSFAVSVGVLYRGNP 180


>Glyma06g25880.1 
          Length = 359

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 56  TSTMTSNSKLSDHSDILPSVLTA-ADLDRFADVANKLADASGEVIRKYFRKKFEILDKDD 114
           T  + +NS LSD    + S+ T         +V    A    +V+ +   K   I  K  
Sbjct: 46  TQPLITNSLLSDKFPTVGSLSTGPIPSTHLIEVVKTAAQTGAQVVMEAVNKPRNITYKGL 105

Query: 115 SSPVTIADKAAEESMISIILENFPSHAIYGEENGWRCKEKFSDYVWVLDPIDGTKSFITG 174
           +  VT  DK +E +++ ++ +NF  H I GEE G    +  SDY+W +DP+DGT +F  G
Sbjct: 106 TDLVTETDKMSEAAILEVVKKNFEDHLILGEEGG-VIGDAASDYLWCIDPLDGTTNFAHG 164

Query: 175 KPLFGTLIALLHQGKP 190
            P F   + +L++G P
Sbjct: 165 YPSFAVSVGVLYRGNP 180


>Glyma15g12230.1 
          Length = 270

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 81  LDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPSH 140
           L  F   A   A  +GE+IRK F +   +  K     VT  DKA EE + + + + +P+H
Sbjct: 7   LSEFLASAVDAAQKAGEIIRKGFYQTKNVEHKGQVDLVTETDKACEELIFNHLKQLYPTH 66

Query: 141 AIYGEEN--GWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIAL 184
              GEE    +   E   +  W++DP+DGT +F+ G P     I L
Sbjct: 67  KFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGL 112


>Glyma15g12230.2 
          Length = 240

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 81  LDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPSH 140
           L  F   A   A  +GE+IRK F +   +  K     VT  DKA EE + + + + +P+H
Sbjct: 7   LSEFLASAVDAAQKAGEIIRKGFYQTKNVEHKGQVDLVTETDKACEELIFNHLKQLYPTH 66

Query: 141 AIYGEEN--GWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIAL 184
              GEE    +   E   +  W++DP+DGT +F+ G P     I L
Sbjct: 67  KFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGL 112


>Glyma09g01380.1 
          Length = 270

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 81  LDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPSH 140
           L  F   A   A  +GE+IRK F +   +  K     VT  DKA EE + + + + +P+H
Sbjct: 7   LSEFLASAVDAAQKAGEIIRKGFYQTKNVEHKGQVDLVTETDKACEELIFNNLKQLYPTH 66

Query: 141 AIYGEEN--GWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIAL 184
              GEE    +   E   +  W++DP+DGT +F+ G P     I L
Sbjct: 67  KFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGL 112


>Glyma07g39620.1 
          Length = 270

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 81  LDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPSH 140
           L  F   A   A  +GE+IRK F +   +  K     VT  D+A E+ + + + + + +H
Sbjct: 7   LSEFLASAVDAACKAGEIIRKGFYQTKNVQHKGLVDLVTETDQACEDLIFTHLKQLYSTH 66

Query: 141 AIYGEEN--GWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIAL 184
              GEE        E   +  W++DP+DGT +F+ G P     I L
Sbjct: 67  KFIGEETTAAGGNAELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGL 112


>Glyma07g39620.2 
          Length = 247

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 81  LDRFADVANKLADASGEVIRKYFRKKFEILDKDDSSPVTIADKAAEESMISIILENFPSH 140
           L  F   A   A  +GE+IRK F +   +  K     VT  D+A E+ + + + + + +H
Sbjct: 7   LSEFLASAVDAACKAGEIIRKGFYQTKNVQHKGLVDLVTETDQACEDLIFTHLKQLYSTH 66

Query: 141 AIYGEEN--GWRCKEKFSDYVWVLDPIDGTKSFITGKPLFGTLIAL 184
              GEE        E   +  W++DP+DGT +F+ G P     I L
Sbjct: 67  KFIGEETTAAGGNAELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGL 112