Jatropha Genome Database

JcCB0075081.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075081.30 - phase: 0 /partial
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37650.1                                                       138   2e-33
Glyma10g29650.1                                                       133   5e-32

>Glyma20g37650.1 
          Length = 279

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   EENVDIIIHHILGVVDSFL-KRSNQLHEMMTSETKQEEFKTLVCDAARPFLAARTDRFVN 59
           EE+VDII+HHIL VV + L  R  Q   M   E KQEEFK  V +AARPFLAARTDRF+ 
Sbjct: 160 EEDVDIIVHHILAVVKAALWTRREQKSHMNAPEKKQEEFKMPVSEAARPFLAARTDRFIY 219

Query: 60  ELELFLASGFNIEAYDDVYIQQLGWNTPGATGESADVEPSVAIPAVPYLYIFDDDSDETD 119
           E++LFLASG NIEAYD VYIQ+LGW++PG   E +  E       +PYLY+FD D DE +
Sbjct: 220 EIQLFLASGMNIEAYDAVYIQRLGWSSPGVNTEVSQSELVDRATVIPYLYLFDGDFDENE 279


>Glyma10g29650.1 
          Length = 281

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   EENVDIIIHHILGVVDSFL-KRSNQLHEMMTSETKQEEFKTLVCDAARPFLAARTDRFVN 59
           EE+VDII+HHIL VV + L  R  Q   M   E KQEEFK  V +AARPFLAARTDRFV 
Sbjct: 162 EEDVDIILHHILAVVKAALWTRREQKSHMNAPEKKQEEFKMSVSEAARPFLAARTDRFVY 221

Query: 60  ELELFLASGFNIEAYDDVYIQQLGWNTPGATGESADVEPSVAIPAVPYLYIFDDDSDETD 119
           E++LFLASG NIEAYD  YIQ+LGW++PG   E +  E       +PY+++FD D DE +
Sbjct: 222 EIQLFLASGMNIEAYDAAYIQRLGWSSPGVNTEVSHSELVDRSTVIPYMHLFDGDFDENE 281