Jatropha Genome Database

JcCB0073371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0073371.10 - phase: 2 /partial
         (280 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g10090.1                                                       175   4e-44
Glyma17g35090.1                                                       162   4e-40
Glyma17g35100.1                                                       148   6e-36
Glyma14g10100.1                                                       146   2e-35

>Glyma14g10090.1 
          Length = 565

 Score =  175 bits (444), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/278 (53%), Positives = 180/278 (64%), Gaps = 27/278 (9%)

Query: 1   MFLN-KEN--LGERMQDSPSLSMPPSNINMKSRE-NPFLNLEQQNSYQESSQI--EFGLV 54
           MF+N KEN    ERM+D  +L M P  + +K +E N F+  + Q+ Y ESS+   EFGLV
Sbjct: 292 MFMNNKENNSTSERMEDCSALPMLPPTLELKPKEKNNFMIHKHQDPYDESSRNNNEFGLV 351

Query: 55  NSDSLLNPSQNGSSLISRNFGSSKELIGQETISQHSVRQFMDDWPK---SQCDQSAVSWP 111
            SDSLLNP+Q  S   S     S +    E+  QHS+R F+DD PK       +S+  WP
Sbjct: 352 TSDSLLNPTQKRSFDSS-----SSQKDDSESQQQHSLRHFIDDSPKPPSHNHHRSSSIWP 406

Query: 112 PLD-VQSNRTQLSISIPIASADFXXXXXXX-NNEKIAPSPLRLSCDLDSIKMGTGTGI-I 168
            LD +QS+RTQLSISIPI+S+DF        +NEK+  SPLRLS  LD I+MG G G   
Sbjct: 407 ELDNIQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSRALDPIQMGLGVGSGA 466

Query: 169 LNEQNQRHANWIPIPWGTSMGGPLGEVLH--NTNNTASEC--KNSSALNLLAE----GWD 220
            NE N R ANWIPI W +SMGGPLGEVL+  N +N + +C   N+SALNL+ +    GWD
Sbjct: 467 SNEANPRQANWIPITWESSMGGPLGEVLNLSNNSNASDQCGKNNTSALNLMKDDDDDGWD 526

Query: 221 CSPRLGSSPTGVLQKTTFHSLSNSSAGSSPRA--ENNK 256
            SP LGSSPTGVLQKT F SLSNSSAGSSPR   ENNK
Sbjct: 527 NSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRGAPENNK 564


>Glyma17g35090.1 
          Length = 658

 Score =  162 bits (410), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/258 (48%), Positives = 157/258 (60%), Gaps = 39/258 (15%)

Query: 4   NKEN---LGERMQDSPSLSMPPSNINMKSREN-PFLNLEQQ---NSYQESSQIEFGLVNS 56
           NKEN     ERMQD P+L M P  + +K +EN PF+  + Q   + Y   +  EFGLV S
Sbjct: 405 NKENNNSTSERMQD-PALPMLPPTLELKPKENNPFMIHKHQIPSDEYSSRNNNEFGLVTS 463

Query: 57  DSLLNPSQNGSSLISRNFGSSKELIGQETISQHSVRQFMDDWPKSQCD---QSAVSWPPL 113
           DSLLNPS+       R+F SS++    E+  QHS+R F+DD PK Q +   +S+  WP L
Sbjct: 464 DSLLNPSEK------RSFTSSQKNDSSESQQQHSLRHFIDDSPKPQSNHHHRSSSIWPEL 517

Query: 114 D-VQSNRTQLSISIPIASADFXXXXXXX--NNEKIAPSPLRLSCDLDSIKMGTGTGIILN 170
           D +QS+RTQLSISIPI+S+D          +NEK+  SPLRLS +LD I+MG G G   N
Sbjct: 518 DNMQSDRTQLSISIPISSSDHFMSFTTSLPSNEKLTLSPLRLSRELDPIQMGLGVGSAPN 577

Query: 171 EQNQRHANWIPIPWGTSMGGPLGEVLHNTNNTASECKNSSALNLLAEGWDCSPRLGSSPT 230
           E N R ANWIPI W +SMGGPLGEVL+ +NN  S  +                   SSPT
Sbjct: 578 EANTRQANWIPITWESSMGGPLGEVLNLSNNNNSNAR-------------------SSPT 618

Query: 231 GVLQKTTFHSLSNSSAGS 248
           GVLQK+ F SLSNSSAGS
Sbjct: 619 GVLQKSAFGSLSNSSAGS 636


>Glyma17g35100.1 
          Length = 483

 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 130/259 (50%), Positives = 156/259 (60%), Gaps = 29/259 (11%)

Query: 28  KSRENPFLNLEQQNSYQESS--QIEFGLVNSDSLLNPSQNGSSLISRNFGSSKELIGQET 85
           K   N F+  + Q  Y ESS  + EFGLV SDSLLNPSQ  S   S +     +    + 
Sbjct: 227 KDNNNSFMVHKHQEPYDESSRNKNEFGLVTSDSLLNPSQKRSFDSSSSSSQKDDSSESQ- 285

Query: 86  ISQHSVRQFMDDWPKSQCDQ------SAVSWPPLD-VQSNRTQLSISIPIASAD--FXXX 136
             QHS+R F+DD PK Q         S+  WP LD +QS+RTQLSISIPI+S+D      
Sbjct: 286 -QQHSLRHFIDDSPKPQSHHNHNHRSSSSIWPELDNMQSDRTQLSISIPISSSDHFMSFA 344

Query: 137 XXXXNNEKIAPSPLRLSCDLDSIKMGTGTGIILNEQNQRHANWIPIPWGTSMGGPLGEV- 195
               +NEK+  SPLRLS + D I+MG G G   NE N R ANWIPI W +SMGGPLGEV 
Sbjct: 345 TSSPSNEKLTLSPLRLSREFDPIQMGLGVGSASNEANTRQANWIPITWESSMGGPLGEVL 404

Query: 196 ----LHNTNNTASEC----KNSSALNLLA-----EGWDCS-PRLGSSPTGVLQKTTFHSL 241
                +N +N + +C     N+SALNL+      +GWD S P +GSSPTGVLQKT F SL
Sbjct: 405 NLSNNNNNSNASDQCGKNNNNTSALNLMKDDDDDDGWDNSPPPIGSSPTGVLQKTAFGSL 464

Query: 242 SNSSAGSSPR-AENNKNTE 259
           SNSSAGSSPR A  N N E
Sbjct: 465 SNSSAGSSPRGAPENNNKE 483


>Glyma14g10100.1 
          Length = 544

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/268 (48%), Positives = 160/268 (59%), Gaps = 45/268 (16%)

Query: 4   NKEN--LGERMQDSPSLSMPPSNINMKSREN-PFLNLEQQNSYQESSQI--EFGLVNSDS 58
           NKEN    ER+QD P+L M P  + +K +EN PF+  +      E S+   EFGLV SDS
Sbjct: 301 NKENNSTSERLQD-PALPMLPPTLELKPKENNPFMIHKHHIPADEYSRNSNEFGLVTSDS 359

Query: 59  LLNPSQNGSSLISRNFGSSKELIGQETISQHSVRQFMDDWPKSQCDQSAVS------WPP 112
           LLNP+Q       R+F SS++    E+  QHS+R F+DD PK Q             WP 
Sbjct: 360 LLNPTQK------RSFTSSQK-DDSESQQQHSLRHFIDDSPKPQSHNHHHHHHSSSIWPE 412

Query: 113 LD-VQSNRTQLSISIPIASADFXXXXXXX-NNEKIAPSPLRLSCDLDSIKM--GTGTGII 168
           LD +QS+RTQLSISIPI+S+DF        +NEK+  SPL  S +LD I+M  G G+G  
Sbjct: 413 LDSMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLGHSRELDPIQMELGMGSGAS 472

Query: 169 LNEQNQRHANWIPIPWGTSMGGPLGEVLHNTNNTASECKNSSALNLLAEGWDCSPRLGSS 228
            NE N R ANWIPI W +SMGGPLGEVL+ +NN+ +                      SS
Sbjct: 473 -NEANTRQANWIPITWESSMGGPLGEVLNLSNNSNAR---------------------SS 510

Query: 229 PTGVLQKTTFHSLSNSSAGSSPRAENNK 256
           PTGVLQK+ F SLSNSSAGSSPRAENNK
Sbjct: 511 PTGVLQKSAFGSLSNSSAGSSPRAENNK 538