Jatropha Genome Database

JcCB0071361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071361.10 + phase: 1 /partial
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01480.1                                                       112   1e-25
Glyma08g45270.1                                                       110   4e-25
Glyma18g08180.1                                                       110   4e-25
Glyma02g47270.1                                                       109   6e-25
Glyma19g07090.1                                                       100   3e-22
Glyma16g06250.1                                                       100   4e-22
Glyma19g25360.1                                                       100   5e-22
Glyma17g13830.1                                                        97   3e-21
Glyma20g16660.1                                                        89   1e-18
Glyma05g03250.1                                                        77   3e-15

>Glyma14g01480.1 
          Length = 466

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 24/100 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A++AISLLL KGVPESNIIFLNL++                        APQG+H VC
Sbjct: 382 NSAVQAISLLLKKGVPESNIIFLNLVS------------------------APQGVHVVC 417

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDEE 100
            ++P++KI+TSEI+  L+ DFRVIPGMG FGDRYFGTD +
Sbjct: 418 KRFPRIKILTSEIEIGLNEDFRVIPGMGEFGDRYFGTDND 457


>Glyma08g45270.1 
          Length = 477

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 24/100 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A++AISLL+ KGVPESNIIFLNLI+                        AP+G+H VC
Sbjct: 393 NSAVQAISLLIKKGVPESNIIFLNLIS------------------------APKGVHVVC 428

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDEE 100
             +P++KIVTSEI+  L+ DFRVIPGMG FGDRYFGTD++
Sbjct: 429 KSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDD 468


>Glyma18g08180.1 
          Length = 477

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 24/100 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A++AISLL+ KGVPESNIIFLNLI+                        AP+G+H VC
Sbjct: 393 NSAVQAISLLIKKGVPESNIIFLNLIS------------------------APKGVHVVC 428

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDEE 100
             +P++KIVTSEI+  L+ DFRVIPGMG FGDRYFGTD++
Sbjct: 429 KSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDD 468


>Glyma02g47270.1 
          Length = 458

 Score =  109 bits (273), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 24/100 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A++AISLLL KGVPESNI+FLNL++                        APQG+H VC
Sbjct: 377 NSAVEAISLLLKKGVPESNILFLNLVS------------------------APQGVHVVC 412

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDEE 100
            ++P++KIVTSEI+  L+  FRVIPGMG FGDRYFGTD++
Sbjct: 413 KRFPRIKIVTSEIEIGLNEAFRVIPGMGEFGDRYFGTDDD 452


>Glyma19g07090.1 
          Length = 416

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 24/99 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A+KAISLLL+KGV ESNIIFLNL+A                        +PQGI+AVC
Sbjct: 342 NSAVKAISLLLNKGVSESNIIFLNLVA------------------------SPQGINAVC 377

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDE 99
            ++P +K+VTSEIDA+L+    VIPG+G FGDRYF TD+
Sbjct: 378 ERFPMIKLVTSEIDASLNEKSHVIPGLGQFGDRYFATDD 416


>Glyma16g06250.1 
          Length = 474

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 24/99 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A +AI LL+ KGVPES+IIFLNLI+                        AP+GIH VC
Sbjct: 400 NSANQAIELLIQKGVPESHIIFLNLIS------------------------APEGIHCVC 435

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDE 99
            ++P +KIVTSEID  ++ ++RVIPG+G FGDRYFGTD+
Sbjct: 436 KRFPSLKIVTSEIDIEINEEYRVIPGLGEFGDRYFGTDD 474


>Glyma19g25360.1 
          Length = 476

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 24/99 (24%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A +AI LL+ KGVPES+IIFLNLI+                        AP+GIH VC
Sbjct: 402 NSANQAIELLIQKGVPESHIIFLNLIS------------------------APEGIHCVC 437

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDE 99
            ++P +KIVTSEID  ++ ++RVIPG+G FGDRYFGTD+
Sbjct: 438 KRFPSLKIVTSEIDIEINEEYRVIPGLGEFGDRYFGTDD 476


>Glyma17g13830.1 
          Length = 451

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 24/97 (24%)

Query: 3   AIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVCNK 62
           A +AI LL+ KGVPES IIFLNLI+                        AP+GIH VC  
Sbjct: 378 ASQAIELLIKKGVPESRIIFLNLIS------------------------APEGIHCVCKH 413

Query: 63  YPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYFGTDE 99
           +P +KIVTSEI+  L++ FRVIPG+G FGDRYFGTD+
Sbjct: 414 FPHLKIVTSEIEEGLNDQFRVIPGLGEFGDRYFGTDD 450


>Glyma20g16660.1 
          Length = 127

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 24/89 (26%)

Query: 12  SKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVCNKYPKVKIVTS 71
            KGVP+SNIIFLNLI+                        A +G+H VC  +P++KIVTS
Sbjct: 63  EKGVPKSNIIFLNLIS------------------------AAKGVHVVCKSFPRIKIVTS 98

Query: 72  EIDATLDNDFRVIPGMGVFGDRYFGTDEE 100
           EI+  L+ DFRVIPGMG FGDRYFGT+++
Sbjct: 99  EIEIGLNEDFRVIPGMGEFGDRYFGTNDD 127


>Glyma05g03250.1 
          Length = 110

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 24/95 (25%)

Query: 1   NCAIKAISLLLSKGVPESNIIFLNLIAVSHSDTNCSSKLQTLFLPYKYDLQAPQGIHAVC 60
           N A +AI LL+ KGV ES IIFLNLI+                        AP+GI  VC
Sbjct: 39  NIASQAIKLLIKKGVSESRIIFLNLIS------------------------APEGILCVC 74

Query: 61  NKYPKVKIVTSEIDATLDNDFRVIPGMGVFGDRYF 95
            ++  +KI+TSEI+  L   F VIPG+G FGDRYF
Sbjct: 75  KRFLHLKIITSEIEEGLKEQFHVIPGLGEFGDRYF 109