Jatropha Genome Database

JcCB0071301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071301.10 - phase: 0 
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09380.1                                                       324   3e-89
Glyma17g35800.1                                                       323   7e-89
Glyma12g29290.1                                                        80   1e-15
Glyma16g26210.1                                                        54   1e-07
Glyma02g07250.1                                                        50   1e-06

>Glyma14g09380.1 
          Length = 483

 Score =  324 bits (831), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 158/197 (80%), Positives = 177/197 (89%)

Query: 1   MSSTVLHIMNSALEWVTVALDAPSARAVVFGVHIGGHLFVEGLLFVVILFLLTQKSYKPP 60
           M+S V++ +N+ L+W+T A D PSARAVVFGVHIGGHLF+E  L VVILFLL+QKSYKPP
Sbjct: 1   MASAVVNFLNATLDWMTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPP 60

Query: 61  KRPLTKKEIDELCNEWVPEPLIPAISEEMQHEPPALESAAGPHTKINGKEVVNFASANYL 120
           KRPLT KEIDELC+EWVPEPLIP++++E+Q+EPP LESAAGPHT INGKEVVNFASANYL
Sbjct: 61  KRPLTNKEIDELCDEWVPEPLIPSVNKELQYEPPVLESAAGPHTIINGKEVVNFASANYL 120

Query: 121 GLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPNSILYSYGLS 180
           G IGH KL++SC+SAL KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP SILYSYGLS
Sbjct: 121 GFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLS 180

Query: 181 TTFSTIPCFCKKGDIIV 197
           T FS IP F KKGDIIV
Sbjct: 181 TMFSAIPAFSKKGDIIV 197


>Glyma17g35800.1 
          Length = 483

 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 157/197 (79%), Positives = 176/197 (89%)

Query: 1   MSSTVLHIMNSALEWVTVALDAPSARAVVFGVHIGGHLFVEGLLFVVILFLLTQKSYKPP 60
           M+S V++ +N+ L+WVT A D PSARAVVFGVHIGGHLF+E  L VVILFLL+QKSYKPP
Sbjct: 1   MASAVVNFLNATLDWVTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPP 60

Query: 61  KRPLTKKEIDELCNEWVPEPLIPAISEEMQHEPPALESAAGPHTKINGKEVVNFASANYL 120
           KRPLT KEIDELC+EWVPEPLIP++++E+Q+EPP LE AAGPHT INGKEVVNFASANYL
Sbjct: 61  KRPLTNKEIDELCDEWVPEPLIPSLNKELQYEPPVLERAAGPHTIINGKEVVNFASANYL 120

Query: 121 GLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPNSILYSYGLS 180
           G IGH KL++SC+SAL KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP SILYSYGLS
Sbjct: 121 GFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLS 180

Query: 181 TTFSTIPCFCKKGDIIV 197
           T FS IP F KKGD+IV
Sbjct: 181 TMFSAIPAFSKKGDVIV 197


>Glyma12g29290.1 
          Length = 81

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 56/99 (56%), Gaps = 18/99 (18%)

Query: 98  SAAGPHTKINGKEVVNFASANYLGLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHL 157
           SA G HT INGKEVVNF   +  G IG+                 +C     +   DVHL
Sbjct: 1   SAVGSHTIINGKEVVNFL-CSAAGTIGN-----------------ACMLMITFLFPDVHL 42

Query: 158 DCEARIAKFLGTPNSILYSYGLSTTFSTIPCFCKKGDII 196
           DCEARIAK LGTP S +YS GLST FS I  F KKGD+I
Sbjct: 43  DCEARIAKILGTPESFMYSDGLSTMFSVILAFSKKGDVI 81


>Glyma16g26210.1 
          Length = 490

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 112 VNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167
           +N  S NYLG    +   E CT      L+KY   +C  R   GT  +HL+ E  +AKF+
Sbjct: 103 LNLGSYNYLGFAAAD---EYCTPRVVDTLKKYSPSTCSTRVDGGTTALHLELEECVAKFV 159

Query: 168 GTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           G P +I++  G  T  + +P    KG++I+
Sbjct: 160 GKPAAIVFGMGYVTNSAILPVLMGKGNLII 189


>Glyma02g07250.1 
          Length = 489

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 112 VNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167
           +N  S NYLG    +   E CT      L+KY   +C  R   GT  +HL+ E  +A F+
Sbjct: 103 LNLGSYNYLGFAAAD---EYCTPRVVDTLKKYSPSTCSTRVDGGTTVLHLELEECVANFV 159

Query: 168 GTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           G P +I++  G  T  + +P    KG +I+
Sbjct: 160 GKPAAIVFGMGYVTNSAILPVLMGKGSLII 189