Jatropha Genome Database

JcCB0070971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0070971.10 + phase: 0 /partial
         (370 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g04110.1                                                       204   1e-52
Glyma13g18290.1                                                       173   2e-43
Glyma09g29120.1                                                        75   8e-14
Glyma16g33660.1                                                        73   6e-13
Glyma16g33660.3                                                        71   2e-12

>Glyma10g04110.1 
          Length = 596

 Score =  204 bits (518), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 193/393 (49%), Gaps = 57/393 (14%)

Query: 1   GDEIPEAMLPEPFNRSKQPAV-----------------ESNTLETXXXXXXXXXXXXPVE 43
           GDEIPE  LPEPFNR K+ +V                  S+ +               V 
Sbjct: 236 GDEIPEGTLPEPFNRPKKDSVLDMLETRLPTKLPPCMRYSDIVNNAESANLDEKLSVLVN 295

Query: 44  TGTLEKHQPAAVASHLSQSFKKRFSQKVAKSESENACIYSPMTCSRQSISPVLEETSLSE 103
           T     ++  A  SH+S SF+    QK    +      +     SR   +P ++    +E
Sbjct: 296 TSVELPNEHLAAPSHMSPSFRADDVQKNPLLDLLQPLAFPVSESSRNENTPFVD----TE 351

Query: 104 PSLITVSSELTDGNKDSTFC-------NSSIGEPMACLLATPCKDMDSINCRDSSAEEIA 156
             L T  ++L      S  C        SS   P     ATP K  +    +D S + I 
Sbjct: 352 SHLKTSPAKLASEASSSESCLTICAPLESSCAHP-----ATPSKTTEYTENKDGSLKSID 406

Query: 157 SFQSTPAKLASTPAALKSATPALRPPKRCYMSPDEDSSSLADKLVRRPPRARSLNFETPV 216
           +  STPAKL STP  L SATPALR PKR YMSPD+ S S  +KL RRPPR+RSL F+TPV
Sbjct: 407 AM-STPAKLVSTPIRLMSATPALRSPKRHYMSPDDHSISSLNKLARRPPRSRSLKFDTPV 465

Query: 217 KNVKNELNGMENVSADNHXXXXXXXXILNILPESLLQSIREKERKVQEERDPAISLAKRR 276
           KN  +                     I + L ES +QSIREKER   E+RDPAI+ AK+R
Sbjct: 466 KNKDD---------------------IFDTLQESTIQSIREKERLAMEKRDPAITEAKKR 504

Query: 277 RQMVACLPKLFNVIHFLFQSINRSVITKEELIHKIIAGHSDIVDRRXXXXXXXXXXXXXX 336
           ++ +A LPKLF++I  L +   R+ ITK EL+ KII+   DI DR               
Sbjct: 505 KKNIASLPKLFDMIRGLLR--QRNCITKAELVSKIISSRCDIADRSEVEEQLNLLQELAP 562

Query: 337 XWISEKSASSGDLLFCINKMSSAENIRSRLEEA 369
            WISEK  SSGDLL  INKM S E +R+ LEEA
Sbjct: 563 EWISEKQVSSGDLLLFINKMLSPETVRASLEEA 595


>Glyma13g18290.1 
          Length = 513

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/222 (47%), Positives = 129/222 (58%), Gaps = 24/222 (10%)

Query: 148 RDSSAEEIASFQSTPAKLASTPAALKSATPALRPPKRCYMSPDEDSSSLADKLVRRPPRA 207
           +D S E I +  STPAKL STP  L SATPALR PKR YMSPD+ S S  +KL R P R+
Sbjct: 315 KDGSLESIDA-TSTPAKLVSTPIRLMSATPALRSPKRRYMSPDDHSISSLNKLARHPSRS 373

Query: 208 RSLNFETPVKNVKNELNGMENVSADNHXXXXXXXXILNILPESLLQSIREKERKVQEERD 267
           RSL F+TPVKN  +                     I + L E  +QSIREKER   EERD
Sbjct: 374 RSLKFDTPVKNKDD---------------------ISDTLQEEFIQSIREKERLAMEERD 412

Query: 268 PAISLAKRRRQMVACLPKLFNVIHFLFQSINRSVITKEELIHKIIAGHSDIVDRRXXXXX 327
           PAI+ AK+R++ +A +PKLF++I  L +   R+ ITK EL+ KII+   DI DR      
Sbjct: 413 PAITQAKKRKKNIASIPKLFDMIRGLLR--QRNCITKAELVSKIISTRCDIADRSEVEEQ 470

Query: 328 XXXXXXXXXXWISEKSASSGDLLFCINKMSSAENIRSRLEEA 369
                     WI EK   SGDLL  INKM S E +R+ LEEA
Sbjct: 471 LNLLQELAPEWIYEKHVYSGDLLLFINKMLSPETVRASLEEA 512


>Glyma09g29120.1 
          Length = 539

 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 50/84 (59%)

Query: 283 LPKLFNVIHFLFQSINRSVITKEELIHKIIAGHSDIVDRRXXXXXXXXXXXXXXXWISEK 342
           L  L NVIH +FQS+ R  ITKEEL+HKI+    D V+ R               WI +K
Sbjct: 451 LLDLVNVIHSIFQSVQRIPITKEELLHKILVNTLDFVEIRAVEEQIESLEKLVPDWICKK 510

Query: 343 SASSGDLLFCINKMSSAENIRSRL 366
             ++GD ++CINK+S  +++RSRL
Sbjct: 511 LVATGDTMYCINKVSDLDSVRSRL 534


>Glyma16g33660.1 
          Length = 1321

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 161/403 (39%), Gaps = 67/403 (16%)

Query: 3    EIPEAMLPEPFNRS------KQPAVESNTLETXXXXXXXXXXXXPVETGTLEKHQPAAVA 56
            +IPEA LPEPF +       K   VE  T ++              +T  L    P  + 
Sbjct: 941  DIPEAPLPEPFGKKSCRSNCKDSHVEEFTGQSPHVNSSTELFSISNQTEML----PEQL- 995

Query: 57   SHLSQSFKKRFSQKVAKSESENACIYSPMTCSRQSISPVLEETSLSEPSLITVSSELTD- 115
              L  SF + FS+K    ++E A  + P   S  S +    +   SE +L      L D 
Sbjct: 996  -QLYPSFSRHFSRKNNTDQAEKAQCFLPTKTSPSSHAFDFLDNEESEKTLQKECVPLYDD 1054

Query: 116  --------GNKDSTFCNS----SIGEPMACLL---ATPCKDMDSINCRDSSAEEIASFQS 160
                    G++  +F  S     I  P+  +    +  C D +S   ++ S    +    
Sbjct: 1055 VANPIMERGHQKESFSMSFEPSVINTPVHMIHPPHSVTCSDSESPYLKNISCAADSFIAE 1114

Query: 161  TPAKLASTPAAL-------------KSATPALRPPKRCY-MSPDEDSSSLA---DKLVRR 203
            TPA+  S PA L             + +T + +P KR    S  ED+  L    DKL   
Sbjct: 1115 TPAQ--SAPARLLPISDVKLQDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEVDKLESI 1172

Query: 204  PPRARSLNFETPVKNVKNELNGMENVSADNHXXXXXXXXILNILPESLLQSIREKERKVQ 263
                   +F    +    + N   +VSA                P+   +S+     K+ 
Sbjct: 1173 RDLHEFDSFPESSRGCSEDCNSFGSVSA----------------PQEAEESLGYASEKIT 1216

Query: 264  EERDPAISLAKRRRQMVACLPKLFNVIHFLFQSINRSVITKEELIHKIIAGHSDIVDRRX 323
            +++    +  K+   ++     L NVIH +FQS+ R  ITKEEL HKI+    D V+ R 
Sbjct: 1217 QKQADLDTQHKKSSPLL----NLVNVIHSIFQSVQRIPITKEELQHKILMNTLDFVEIRE 1272

Query: 324  XXXXXXXXXXXXXXWISEKSASSGDLLFCINKMSSAENIRSRL 366
                          WI +K  ++GD ++CINK+S  +++RSRL
Sbjct: 1273 VEEQIEYLEKLVPDWICKKLVATGDTVYCINKVSDLDSVRSRL 1315


>Glyma16g33660.3 
          Length = 96

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 49/84 (58%)

Query: 283 LPKLFNVIHFLFQSINRSVITKEELIHKIIAGHSDIVDRRXXXXXXXXXXXXXXXWISEK 342
           L  L NVIH +FQS+ R  ITKEEL HKI+    D V+ R               WI +K
Sbjct: 7   LLNLVNVIHSIFQSVQRIPITKEELQHKILMNTLDFVEIREVEEQIEYLEKLVPDWICKK 66

Query: 343 SASSGDLLFCINKMSSAENIRSRL 366
             ++GD ++CINK+S  +++RSRL
Sbjct: 67  LVATGDTVYCINKVSDLDSVRSRL 90