Jatropha Genome Database

JcCB0070851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0070851.10 - phase: 0 /partial
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29650.1                                                       178   2e-45
Glyma20g37650.1                                                       172   1e-43

>Glyma10g29650.1 
          Length = 281

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 89/108 (82%)

Query: 21  CPICLGPFIQESYLDSCFHKFCYNCILRWTKVVAGKHSRAPSSVKCPLCKTENLSIIYGY 80
           CPICLGPF+Q SYLD CFHKFC+NCILRWTKVVAGKH   PSSVKCPLCKTEN SIIYG 
Sbjct: 29  CPICLGPFLQLSYLDKCFHKFCFNCILRWTKVVAGKHRSPPSSVKCPLCKTENFSIIYGV 88

Query: 81  DGSSFQRHCINETHEHSSFFSKAHKYRLRCYYTEPGTLSNIVNVSRYW 128
           DGS FQRH +N+  E S   S+AH+YRL+CYYTE G L +I N+S+YW
Sbjct: 89  DGSCFQRHYVNQDFEDSFILSRAHRYRLQCYYTEQGFLDDIFNISQYW 136


>Glyma20g37650.1 
          Length = 279

 Score =  172 bits (435), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%)

Query: 11  EPSSSQDSNPCPICLGPFIQESYLDSCFHKFCYNCILRWTKVVAGKHSRAPSSVKCPLCK 70
           EP     S  CPICLGPF+Q SYLD CFHKFC+NCILRWTKVVA KH   PSSVKCPLCK
Sbjct: 17  EPEVEDSSCCCPICLGPFLQLSYLDKCFHKFCFNCILRWTKVVASKHRSPPSSVKCPLCK 76

Query: 71  TENLSIIYGYDGSSFQRHCINETHEHSSFFSKAHKYRLRCYYTEPGTLSNIVNVSRYW 128
           TEN SIIY  DGS FQRH +N+  E+S   S+AH+YR++CYYTE G + +I N+S+YW
Sbjct: 77  TENFSIIYVVDGSCFQRHYVNQDFENSFILSRAHRYRVQCYYTEQGFVDDIFNISQYW 134