Jatropha Genome Database

JcCB0068361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0068361.10 + phase: 0 /partial
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g01260.1                                                       213   4e-56
Glyma07g39500.1                                                       213   4e-56
Glyma10g32650.1                                                       198   1e-51
Glyma20g34950.1                                                        57   4e-09

>Glyma17g01260.1 
          Length = 254

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/135 (74%), Positives = 111/135 (82%)

Query: 1   MADGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKR 60
           MA+ ISSFWGPVTST ECCE NYA SSYIAEF+NTISNIP             RQ+FEKR
Sbjct: 1   MAESISSFWGPVTSTKECCEINYAYSSYIAEFFNTISNIPTILLALIGLINALRQRFEKR 60

Query: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFL 120
           FSVLH+SNM LAIGSM +HATLQ VQQQSDETPMVWE+LLY+YILYSPDWHY STMP FL
Sbjct: 61  FSVLHVSNMTLAIGSMLYHATLQHVQQQSDETPMVWEVLLYMYILYSPDWHYRSTMPIFL 120

Query: 121 FLYGAVFAMVHSVVH 135
           F+YGA+FA+ HSV H
Sbjct: 121 FVYGALFAVAHSVFH 135


>Glyma07g39500.1 
          Length = 254

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/135 (74%), Positives = 111/135 (82%)

Query: 1   MADGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKR 60
           MA+ ISSFWGPVTST ECCE NYA SSYIAEF+NTISNIP             RQ+FEKR
Sbjct: 1   MAESISSFWGPVTSTKECCEINYAYSSYIAEFFNTISNIPTILLALIGLINALRQRFEKR 60

Query: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFL 120
           FSVLH+SNM LAIGSM +HATLQ VQQQSDETPMVWE+LLY+YILYSPDWHY STMP FL
Sbjct: 61  FSVLHVSNMTLAIGSMLYHATLQHVQQQSDETPMVWEVLLYMYILYSPDWHYRSTMPIFL 120

Query: 121 FLYGAVFAMVHSVVH 135
           F+YGA+FA+ HSV H
Sbjct: 121 FVYGALFAVAHSVFH 135


>Glyma10g32650.1 
          Length = 255

 Score =  198 bits (504), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 108/135 (80%)

Query: 1   MADGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKR 60
           MA+ ISSFWGPVTSTT+CCEKNYA SSYIAEFYNTISNIP              Q+FEKR
Sbjct: 1   MAEIISSFWGPVTSTTDCCEKNYAYSSYIAEFYNTISNIPTILLALIGLISAHTQRFEKR 60

Query: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFL 120
           F VLH+S M  AIGSM +HATLQ V+QQS+ETPM+WE+LLY+YILYSPDWHY  TMP FL
Sbjct: 61  FCVLHLSIMAFAIGSMLYHATLQHVKQQSNETPMMWEILLYIYILYSPDWHYPRTMPIFL 120

Query: 121 FLYGAVFAMVHSVVH 135
            LYGA+FA+VHSV+ 
Sbjct: 121 CLYGAIFAIVHSVLR 135


>Glyma20g34950.1 
          Length = 118

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 88  QSDETPMVWEMLLYLYILYSPDWHYHSTMPTFLFLYGAVFAMVHSVV 134
           QS E  M+WE+LLY+YILYSP W Y  TMP FL LYG  F  VH V+
Sbjct: 1   QSHENLMMWEILLYIYILYSPGWQYPRTMPIFLCLYGIGFK-VHYVI 46