Jatropha Genome Database

JcCB0067131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0067131.10 - phase: 0 /partial
         (183 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g32980.1                                                       198   3e-51
Glyma10g34570.1                                                       196   1e-50
Glyma10g34570.2                                                       196   1e-50
Glyma09g02480.1                                                        62   4e-10

>Glyma20g32980.1 
          Length = 1034

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/163 (61%), Positives = 116/163 (71%), Gaps = 6/163 (3%)

Query: 21  RDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQLVGNRYRDLIDSADSIVLMKSSCES 80
           RDAE+LFRSKPI++IR  EA TRKQI+DKKEELRQLVGNRYRDLIDSADSIVLMK SC  
Sbjct: 1   RDAESLFRSKPIAEIRKTEAATRKQIEDKKEELRQLVGNRYRDLIDSADSIVLMKVSCNG 60

Query: 81  ISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIRIYGIACRVKYLVDTPENIWGCLDES 140
           ISSN+A                  K  + +  R   YG ACRVKYLVDTPENIWGCLDE 
Sbjct: 61  ISSNIAAVHGRIRSLSQSQSQSQTKLHSQS--RAWTYGAACRVKYLVDTPENIWGCLDEG 118

Query: 141 MFLEAAGRYIRAKHVHYNLMQANNANAEWDHTKILSNFPLLQH 183
           MFLEAA RY+RAK+VH++L      +++    K LSNF +LQH
Sbjct: 119 MFLEAASRYVRAKNVHHHLF----VDSDDQKKKFLSNFAMLQH 157


>Glyma10g34570.1 
          Length = 1059

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/175 (58%), Positives = 120/175 (68%), Gaps = 9/175 (5%)

Query: 9   DDRSATLSGGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQLVGNRYRDLIDSA 68
           D R +T+   G RDAE+LFRSKPI++IR  EA TRKQI+DKKEELRQLVGNRYRDLIDSA
Sbjct: 17  DHRISTI---GSRDAESLFRSKPIAEIRKTEAATRKQIEDKKEELRQLVGNRYRDLIDSA 73

Query: 69  DSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIRIYGIACRVKYLVD 128
           DSIV MK SC  IS N+A                  K  + +  R   YG ACRVKY+VD
Sbjct: 74  DSIVRMKGSCNGISGNIAVVHDRIRSLSQSQSQSQTKLHSQS--RAWTYGAACRVKYIVD 131

Query: 129 TPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNANAEWDHTKILSNFPLLQH 183
           TPENIWGCLDE MFLEAA RY+RAK+VH++L      +++    K LSNF +LQH
Sbjct: 132 TPENIWGCLDEGMFLEAASRYVRAKYVHHHLF----VDSDDQKKKFLSNFAMLQH 182


>Glyma10g34570.2 
          Length = 884

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/175 (58%), Positives = 120/175 (68%), Gaps = 9/175 (5%)

Query: 9   DDRSATLSGGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQLVGNRYRDLIDSA 68
           D R +T+   G RDAE+LFRSKPI++IR  EA TRKQI+DKKEELRQLVGNRYRDLIDSA
Sbjct: 17  DHRISTI---GSRDAESLFRSKPIAEIRKTEAATRKQIEDKKEELRQLVGNRYRDLIDSA 73

Query: 69  DSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIRIYGIACRVKYLVD 128
           DSIV MK SC  IS N+A                  K  + +  R   YG ACRVKY+VD
Sbjct: 74  DSIVRMKGSCNGISGNIAVVHDRIRSLSQSQSQSQTKLHSQS--RAWTYGAACRVKYIVD 131

Query: 129 TPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNANAEWDHTKILSNFPLLQH 183
           TPENIWGCLDE MFLEAA RY+RAK+VH++L      +++    K LSNF +LQH
Sbjct: 132 TPENIWGCLDEGMFLEAASRYVRAKYVHHHLF----VDSDDQKKKFLSNFAMLQH 182


>Glyma09g02480.1 
          Length = 89

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 34/39 (87%)

Query: 46 IQDKKEELRQLVGNRYRDLIDSADSIVLMKSSCESISSN 84
          I+DKKEEL QLVGN+Y DLIDSADSI+ MK+SC  ISS+
Sbjct: 1  IKDKKEELWQLVGNQYHDLIDSADSIICMKASCNGISSD 39