Jatropha Genome Database

JcCB0065971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0065971.10 + phase: 0 
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27020.2                                                       245   2e-65
Glyma16g27020.1                                                       238   2e-63
Glyma03g40280.3                                                       201   2e-52
Glyma03g40280.1                                                       201   2e-52
Glyma19g42890.2                                                       197   3e-51
Glyma19g42890.1                                                       197   3e-51
Glyma11g19840.2                                                       184   2e-47
Glyma12g08650.1                                                       180   7e-46
Glyma11g19840.3                                                       178   2e-45
Glyma11g19840.1                                                       177   6e-45
Glyma12g30260.1                                                       175   2e-44
Glyma19g42890.3                                                       133   7e-32
Glyma03g40280.2                                                       115   2e-26
Glyma05g04170.1                                                        60   1e-09

>Glyma16g27020.2 
          Length = 160

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKD 76
           G+ N+RGS+ F+Q PNG THVTGR+TGLS G HGFHIHAFGDTTNGCNSTGPHFNPFKKD
Sbjct: 16  GDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTGPHFNPFKKD 75

Query: 77  HGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAG 136
           HGAP+D +RHAGDLGNI  GPDG+AE+S++D QIPL+G HSI+GRAVVVHADPDDLG+ G
Sbjct: 76  HGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGRAVVVHADPDDLGR-G 134

Query: 137 GHELSKTTGNAGARVGCGIIGLHSSV 162
           GHELSKTTGNAGARV CGIIGL SSV
Sbjct: 135 GHELSKTTGNAGARVACGIIGLQSSV 160


>Glyma16g27020.1 
          Length = 167

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 132/153 (86%), Gaps = 8/153 (5%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNST-------GPH 69
           G+ N+RGS+ F+Q PNG THVTGR+TGLS G HGFHIHAFGDTTNGCNST       GPH
Sbjct: 16  GDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTVLTSSTPGPH 75

Query: 70  FNPFKKDHGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADP 129
           FNPFKKDHGAP+D +RHAGDLGNI  GPDG+AE+S++D QIPL+G HSI+GRAVVVHADP
Sbjct: 76  FNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGRAVVVHADP 135

Query: 130 DDLGKAGGHELSKTTGNAGARVGCGIIGLHSSV 162
           DDLG+ GGHELSKTTGNAGARV CGIIGL SSV
Sbjct: 136 DDLGR-GGHELSKTTGNAGARVACGIIGLQSSV 167


>Glyma03g40280.3 
          Length = 152

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 113/139 (81%), Gaps = 1/139 (0%)

Query: 21  VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
           V G+IHFVQ  +GPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP  K+HGAP
Sbjct: 14  VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 81  TDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAGGHEL 140
            D+ RHAGDLGN+ VG DG    ++ D QIPL+GP++I+GRAVVVHADPDDLGK GGHEL
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPDDLGK-GGHEL 132

Query: 141 SKTTGNAGARVGCGIIGLH 159
           SKTTGNAG RV CGIIGL 
Sbjct: 133 SKTTGNAGGRVACGIIGLQ 151


>Glyma03g40280.1 
          Length = 152

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 113/139 (81%), Gaps = 1/139 (0%)

Query: 21  VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
           V G+IHFVQ  +GPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP  K+HGAP
Sbjct: 14  VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 81  TDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAGGHEL 140
            D+ RHAGDLGN+ VG DG    ++ D QIPL+GP++I+GRAVVVHADPDDLGK GGHEL
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPDDLGK-GGHEL 132

Query: 141 SKTTGNAGARVGCGIIGLH 159
           SKTTGNAG RV CGIIGL 
Sbjct: 133 SKTTGNAGGRVACGIIGLQ 151


>Glyma19g42890.2 
          Length = 152

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/139 (71%), Positives = 109/139 (78%), Gaps = 1/139 (0%)

Query: 21  VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
           V G+I F Q  NGPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP   +HGAP
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 81  TDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAGGHEL 140
            D+ RHAGDLGN+ VG DG    S+ D QIPL+GP+SI+GRAVVVHAD DDLGK GGHEL
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGK-GGHEL 132

Query: 141 SKTTGNAGARVGCGIIGLH 159
           SKTTGNAG RV CGIIGL 
Sbjct: 133 SKTTGNAGGRVACGIIGLQ 151


>Glyma19g42890.1 
          Length = 152

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/139 (71%), Positives = 109/139 (78%), Gaps = 1/139 (0%)

Query: 21  VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
           V G+I F Q  NGPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP   +HGAP
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 81  TDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAGGHEL 140
            D+ RHAGDLGN+ VG DG    S+ D QIPL+GP+SI+GRAVVVHAD DDLGK GGHEL
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGK-GGHEL 132

Query: 141 SKTTGNAGARVGCGIIGLH 159
           SKTTGNAG RV CGIIGL 
Sbjct: 133 SKTTGNAGGRVACGIIGLQ 151


>Glyma11g19840.2 
          Length = 204

 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 109/142 (76%), Gaps = 1/142 (0%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKD 76
           G   V G    +Q  +GPT V+ RITGL+PGLHGFH+H +GDTTNGC STG HFNP K  
Sbjct: 61  GTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLT 120

Query: 77  HGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAG 136
           HGAP D+ RHAGDLGNIV   +G+AE ++ D QIPLSGP+S++GRA+VVH   DDLGK G
Sbjct: 121 HGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGK-G 179

Query: 137 GHELSKTTGNAGARVGCGIIGL 158
           GHELS TTGNAG R+ CG++GL
Sbjct: 180 GHELSLTTGNAGGRLACGVVGL 201


>Glyma12g08650.1 
          Length = 204

 Score =  180 bits (456), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 107/142 (75%), Gaps = 1/142 (0%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKD 76
           G   V G    +Q  +GPT V+  ITGL+PGLHGFH+H +GDTTNGC STG HFNP    
Sbjct: 61  GTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNNLT 120

Query: 77  HGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAG 136
           HGAP D+ RHAGDLGNIV   +G+AE ++ D QIPLSGP+S++GRA+VVH   DDLGK G
Sbjct: 121 HGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGK-G 179

Query: 137 GHELSKTTGNAGARVGCGIIGL 158
           GHELS TTGNAG R+ CG++GL
Sbjct: 180 GHELSLTTGNAGGRLACGVVGL 201


>Glyma11g19840.3 
          Length = 203

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 2/142 (1%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKD 76
           G   V G    +Q  +GPT V+ RITGL+PGLHGFH+H +GDTTNGC STG HFNP K  
Sbjct: 61  GTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLT 120

Query: 77  HGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAG 136
           HGAP D+ RHAGDLGNIV   +G+AE ++ D QIPLSGP+S++GRA+VVH   DDLGK G
Sbjct: 121 HGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGK-G 179

Query: 137 GHELSKTTGNAGARVGCGIIGL 158
           GHELS TTGNAG R+ C ++GL
Sbjct: 180 GHELSLTTGNAGGRLAC-VVGL 200


>Glyma11g19840.1 
          Length = 209

 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 104/137 (75%), Gaps = 1/137 (0%)

Query: 17  GEPNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKD 76
           G   V G    +Q  +GPT V+ RITGL+PGLHGFH+H +GDTTNGC STG HFNP K  
Sbjct: 61  GTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLT 120

Query: 77  HGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAG 136
           HGAP D+ RHAGDLGNIV   +G+AE ++ D QIPLSGP+S++GRA+VVH   DDLGK G
Sbjct: 121 HGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGK-G 179

Query: 137 GHELSKTTGNAGARVGC 153
           GHELS TTGNAG R+ C
Sbjct: 180 GHELSLTTGNAGGRLAC 196


>Glyma12g30260.1 
          Length = 183

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/143 (62%), Positives = 107/143 (74%), Gaps = 2/143 (1%)

Query: 17  GEPNVRGSIHFVQRP-NGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKK 75
           G  +V G +   Q+  NGPT VT R++GL+PG HGFH+H FGD TNGC STGPHFNP K 
Sbjct: 39  GNSSVHGLVTLTQQQDNGPTTVTVRVSGLTPGPHGFHLHEFGDITNGCISTGPHFNPNKL 98

Query: 76  DHGAPTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKA 135
            HGAP DK RHAGDLGNIV   DG+AE +  D QIPL GP+S++GRA+VVH   DDLGK 
Sbjct: 99  KHGAPEDKIRHAGDLGNIVANADGVAEATTVDNQIPLIGPNSVVGRALVVHELEDDLGK- 157

Query: 136 GGHELSKTTGNAGARVGCGIIGL 158
           GG ELS +TGNAG R+ CG++GL
Sbjct: 158 GGQELSLSTGNAGGRLACGVVGL 180


>Glyma19g42890.3 
          Length = 116

 Score =  133 bits (335), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/139 (53%), Positives = 80/139 (57%), Gaps = 37/139 (26%)

Query: 21  VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
           V G+I F Q  NGPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP   +HGAP
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 81  TDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPDDLGKAGGHEL 140
            D+ RHAGDLGN+ VG D                                     GGHEL
Sbjct: 74  EDENRHAGDLGNVNVGDD-------------------------------------GGHEL 96

Query: 141 SKTTGNAGARVGCGIIGLH 159
           SKTTGNAG RV CGIIGL 
Sbjct: 97  SKTTGNAGGRVACGIIGLQ 115


>Glyma03g40280.2 
          Length = 109

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 62/78 (79%)

Query: 21 VRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGAP 80
          V G+IHFVQ  +GPT VTG + GL PGLHGFH+HA GDTTNGC STG HFNP  K+HGAP
Sbjct: 14 VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 81 TDKERHAGDLGNIVVGPD 98
           D+ RHAGDLGN+ VG D
Sbjct: 74 EDENRHAGDLGNVNVGDD 91


>Glyma05g04170.1 
          Length = 304

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)

Query: 19  PNVRGSIHFVQRPNGPTHVTGRITGLSPGLHGFHIHAFGDTTNGCNSTGPHFNPFKKDHG 78
           P++ G +   Q       +    +GLSPG HG+ I+ FGD T G  STG  FNP  +++ 
Sbjct: 156 PDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNEENS 215

Query: 79  APTDKERHAGDLGNIVVGPDGIAEVSVKDMQIPLSGPHSILGRAVVVHADPD 130
                +   GDLG +     G A  S    ++ ++    ++GR+VVV+A  D
Sbjct: 216 -----KEPLGDLGTLEANEKGEAFYSGVKEKLRVA---DLIGRSVVVYATED 259