Jatropha Genome Database

JcCB0065691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0065691.10 - phase: 0 
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10370.2                                                       203   5e-53
Glyma14g35710.1                                                       202   6e-53
Glyma02g37440.1                                                       202   1e-52
Glyma06g10370.1                                                       174   2e-44
Glyma04g10510.2                                                       124   3e-29
Glyma04g10510.1                                                        96   1e-20

>Glyma06g10370.2 
          Length = 133

 Score =  203 bits (516), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 93/131 (70%), Positives = 115/131 (87%), Gaps = 1/131 (0%)

Query: 1   MAASSSRGGSFYGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQL 60
           M++ S +G SFYG AAPYRS++GLSTRP ASSDEIQL IDP   DFDDEI+GLR QVK+L
Sbjct: 1   MSSHSHKGTSFYGDAAPYRSREGLSTRPVASSDEIQLHIDP-GIDFDDEITGLRGQVKKL 59

Query: 61  RNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFALL 120
           +NVA+EIGSE KFQ+DFL+Q+QM +I+AQAGVKNN+R+LNKSI+KNG N+IVHV+ FAL+
Sbjct: 60  KNVAEEIGSEVKFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALV 119

Query: 121 CFTVVYLWSKV 131
           CF +VY WSK+
Sbjct: 120 CFFIVYFWSKM 130


>Glyma14g35710.1 
          Length = 132

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 118/133 (88%), Gaps = 2/133 (1%)

Query: 1   MAASSSRGGSFYGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQL 60
           MAA+S R GS YGGAAPYRS+DGLSTRP  +S+EIQLRIDP+  D DDEI+GL  QV++L
Sbjct: 1   MAANSHRLGSSYGGAAPYRSRDGLSTRPVGASEEIQLRIDPL--DLDDEITGLHRQVRRL 58

Query: 61  RNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFALL 120
           ++VA+EIG+E K+QK FL++LQMT+IKAQAGVKNN+R+LNKSI+++G NHI+HV++FAL+
Sbjct: 59  KHVAEEIGTEVKYQKTFLEELQMTMIKAQAGVKNNLRRLNKSIVQSGSNHIIHVIIFALV 118

Query: 121 CFTVVYLWSKVLQ 133
           CF VVYLWSK+ +
Sbjct: 119 CFFVVYLWSKMFR 131


>Glyma02g37440.1 
          Length = 132

 Score =  202 bits (513), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 118/133 (88%), Gaps = 2/133 (1%)

Query: 1   MAASSSRGGSFYGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQL 60
           M A+S R GS YGGAAPYRS+DGLS RP  +S+EIQLRIDP+  D DDEI+GL  QV++L
Sbjct: 1   MVANSHRVGSSYGGAAPYRSRDGLSPRPVGASEEIQLRIDPL--DLDDEITGLHRQVRRL 58

Query: 61  RNVAQEIGSEAKFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFALL 120
           ++VA+EIG+E K+QK+FL++LQMT+IKAQAGVKNN+R+LNKSII++G NHI+HV+LFAL+
Sbjct: 59  KHVAEEIGTEVKYQKNFLEELQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIIHVILFALV 118

Query: 121 CFTVVYLWSKVLQ 133
           CF VVYLWSK+++
Sbjct: 119 CFFVVYLWSKMIR 131


>Glyma06g10370.1 
          Length = 142

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 101/120 (84%), Gaps = 1/120 (0%)

Query: 12  YGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQLRNVAQEIGSEA 71
           +   +    ++GLSTRP ASSDEIQL IDP   DFDDEI+GLR QVK+L+NVA+EIGSE 
Sbjct: 21  FNSISCVNCREGLSTRPVASSDEIQLHIDP-GIDFDDEITGLRGQVKKLKNVAEEIGSEV 79

Query: 72  KFQKDFLDQLQMTVIKAQAGVKNNIRKLNKSIIKNGGNHIVHVVLFALLCFTVVYLWSKV 131
           KFQ+DFL+Q+QM +I+AQAGVKNN+R+LNKSI+KNG N+IVHV+ FAL+CF +VY WSK+
Sbjct: 80  KFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVCFFIVYFWSKM 139


>Glyma04g10510.2 
          Length = 80

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 71/81 (87%), Gaps = 1/81 (1%)

Query: 1  MAASSSRGGSFYGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQL 60
          M+++S RG SFYG AAPYRS++GLSTRP ASSDEIQL IDP   DFDDEI+GLR QV++L
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDP-GVDFDDEITGLRGQVRKL 59

Query: 61 RNVAQEIGSEAKFQKDFLDQL 81
          +NVA+EIGSE KFQ+DFL+Q+
Sbjct: 60 KNVAEEIGSEVKFQRDFLEQV 80


>Glyma04g10510.1 
          Length = 84

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 1  MAASSSRGGSFYGGAAPYRSKDGLSTRPAASSDEIQLRIDPMHADFDDEISGLRSQVKQL 60
          M+++S RG SFYG AAPYRS++GLSTRP ASSDEIQL IDP   DFDDEI+GLR QV++L
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDPG-VDFDDEITGLRGQVRKL 59

Query: 61 RNV 63
          +NV
Sbjct: 60 KNV 62