Jatropha Genome Database

JcCB0063711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0063711.10 - phase: 2 /partial
         (394 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08320.1                                                       473   e-133
Glyma17g12660.1                                                       462   e-130
Glyma14g01070.1                                                       358   7e-99
Glyma17g12660.2                                                       306   2e-83

>Glyma05g08320.1 
          Length = 659

 Score =  473 bits (1218), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/371 (63%), Positives = 290/371 (78%), Gaps = 6/371 (1%)

Query: 26  QVFDMVNREAFNQSLGVNVTGIQENYLQLSISTGTSVFLSLVPSVEDEQTADGGGHQISE 85
           QVFD+VNREAFN   GV+VTGI+ENYLQLS+   TSV+L+LV + +D  T +G     +E
Sbjct: 293 QVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQETSVYLTLVSNSQDHSTVEGELTDNAE 352

Query: 86  TAVLPLDSIDEVKLPEEKHVYLHKKSRFPNRISCEIYLQQIFHEHVFLKAKDRPLPTGTR 145
            A+LPL+S D +K   +++     K +F N I  EIY+QQIFHE++F K  D+P  +G R
Sbjct: 353 NAILPLESSDGMKREAKQNT--SNKGQFSNSICYEIYIQQIFHEYIFGKGGDKPSSSGNR 410

Query: 146 VSS-QLKDGSGLLGHFCMTVAHRIFSNKVLMELENVICKVPYLHLISHPTWHSRTSSWTI 204
           +S  Q KDGS LLGHF  ++AHRIFS KVL ELENV+CKVPY+ LIS+PTWHSR SSWT+
Sbjct: 411 LSGIQAKDGSSLLGHFFKSLAHRIFSTKVLAELENVVCKVPYIQLISNPTWHSRASSWTL 470

Query: 205 FMKVPQSILHASSHSQTSDMKSMKSDIKTEFRTKVVVNDDSINVEAEGAPNVVGLFKGSS 264
           +M+VPQSIL  S  ++TSD    K+ +K +F TKVVVNDD INV+AEG+PNV GLFKG  
Sbjct: 471 YMEVPQSILRGS-QTKTSDYYE-KNAVKRQFWTKVVVNDDCINVKAEGSPNVAGLFKGKI 528

Query: 265 DDTCSMNKYDCDLADLPAIILQQVASQVIRWLHEEALTVGIKANRDFLSLSFELDQGEVL 324
           ++T S+NKY+C+LADLP IILQQVASQ+I WL++EA+ VGIKANRDFL LS EL+QGE L
Sbjct: 529 EETHSINKYNCNLADLPVIILQQVASQIINWLYQEAMMVGIKANRDFLCLSLELEQGETL 588

Query: 325 SMVAHVDPEDVEGCISWWLVMEDGFA-EKKLHMDIADDASECRKFLGYLPLDVLYSTLMD 383
            +VA VDPED EGCISWWLVMED FA E+KLHM I D ASE RKFLG+L LD+LY+TL+D
Sbjct: 589 GLVASVDPEDSEGCISWWLVMEDSFAEEQKLHMSITDGASEYRKFLGHLSLDLLYATLID 648

Query: 384 LVTLCSGGGSH 394
           LV+LCSGGGS 
Sbjct: 649 LVSLCSGGGSQ 659


>Glyma17g12660.1 
          Length = 660

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/371 (62%), Positives = 285/371 (76%), Gaps = 6/371 (1%)

Query: 26  QVFDMVNREAFNQSLGVNVTGIQENYLQLSISTGTSVFLSLVPSVEDEQTADGGGHQISE 85
           QVFD+VNREAFN   GV+VTGI+ENYLQLS+  GTSV+L+LV + +D  T +   +   E
Sbjct: 294 QVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQGTSVYLTLVSNSQDHSTVEDELNDNVE 353

Query: 86  TAVLPLDSIDEVKLPEEKHVYLHKKSRFPNRISCEIYLQQIFHEHVFLKAKDRPLPTGTR 145
            A+LPL+S D +K   +++    KK +F N I  EIY+QQIFHEH+F K  ++ + +G R
Sbjct: 354 NAILPLESSDGMKREAKQNT--SKKGQFSNSICYEIYIQQIFHEHIFGKGDEKAISSGNR 411

Query: 146 VSS-QLKDGSGLLGHFCMTVAHRIFSNKVLMELENVICKVPYLHLISHPTWHSRTSSWTI 204
           +S  Q +DGS LLGHF  ++AHRIFS KVL ELENV+CKVPYL LIS+PTW+SR SSWT+
Sbjct: 412 LSGVQARDGSSLLGHFFKSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWNSRASSWTL 471

Query: 205 FMKVPQSILHASSHSQTSDMKSMKSDIKTEFRTKVVVNDDSINVEAEGAPNVVGLFKGSS 264
           +M+VPQSIL  S  ++TSD    K+  K +F TKVVVNDD INV+AEG+PNV GLFKG  
Sbjct: 472 YMEVPQSILRGS-QTKTSDYYE-KNAAKRQFWTKVVVNDDCINVKAEGSPNVAGLFKGKI 529

Query: 265 DDTCSMNKYDCDLADLPAIILQQVASQVIRWLHEEALTVGIKANRDFLSLSFELDQGEVL 324
           ++T S+NKY+C+LADLP IILQQVASQ+I WL++EA+ VGIK NRDFL LS EL QGE L
Sbjct: 530 EETHSINKYNCNLADLPVIILQQVASQIINWLYQEAMMVGIKVNRDFLCLSLELKQGETL 589

Query: 325 SMVAHVDPEDVEGCISWWLVMEDGFA-EKKLHMDIADDASECRKFLGYLPLDVLYSTLMD 383
            +VA VDPED E CISWWLVMED FA E+KLHM I D ASE RKFLG+L LD+LY+TL+D
Sbjct: 590 GLVASVDPEDSEECISWWLVMEDSFAEEQKLHMSITDGASEYRKFLGHLSLDLLYATLID 649

Query: 384 LVTLCSGGGSH 394
           LV LCSGGG  
Sbjct: 650 LVGLCSGGGGQ 660


>Glyma14g01070.1 
          Length = 628

 Score =  358 bits (918), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 196/362 (54%), Positives = 238/362 (65%), Gaps = 61/362 (16%)

Query: 42  VNVTGIQENYLQLSISTGTSVFLSLVPSVEDEQTADGGGHQISETAVLPLDSIDEVKLPE 101
            +V GI+ENYLQLS+  GTSV+L LV + +D  T +G      E A+LP           
Sbjct: 319 ASVIGIRENYLQLSLGQGTSVYLILVSNSQDHSTVEGELTDNVENAILP----------- 367

Query: 102 EKHVYLHKKSRFPNRISCEIYLQQIFHEHVFLKAKDRPLPTGTRVSS-QLKDGSGLLGHF 160
                  KK+   N I  EI +QQIF EH+F K  ++P+  G R+S  Q KDGS LLGHF
Sbjct: 368 ------SKKALLSNSICYEIDIQQIFLEHIFGKGGEKPISVGNRLSGVQEKDGSSLLGHF 421

Query: 161 CMTVAHRIFSNKVLMELENVICKVPYLHLISHPTWHSRTSSWTIFMKVPQSILHASSHSQ 220
             ++AHRIFS KVL ELENV+CKVPYL LIS+PTWHSR SSWTI+M              
Sbjct: 422 LKSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWHSRASSWTIYM-------------- 467

Query: 221 TSDMKSMKSDIKTEFRTKVVVNDDSINVEAEGAPNVVGLFKGSSDDTCSMNKYDCDLADL 280
                      + +F TK+VVNDD INV+AEG+PN          +T S+NKY+C+LADL
Sbjct: 468 -----------ERQFWTKLVVNDDCINVKAEGSPN----------ETHSINKYNCNLADL 506

Query: 281 PAIILQQ------VASQVIRWLHEEALTVGIKANRDFLSLSFELDQGEVLSMVAH-VDPE 333
           P II+QQ      VASQ+I  L++EA+ VGIKANRDFL LSFEL+QGE L +VA  VDPE
Sbjct: 507 PVIIMQQIKIFIYVASQIINRLYQEAMVVGIKANRDFLCLSFELEQGETLGLVASVVDPE 566

Query: 334 DVEGCISWWLVMEDGFA-EKKLHMDIADDASECRKFLGYLPLDVLYSTLMDLVTLCSGGG 392
           + EGCISWWLVMED FA E+KLHM I D ASE RKFLG+L LD+LY+TL+DLV LCSGGG
Sbjct: 567 NSEGCISWWLVMEDSFAEEQKLHMSITDGASEYRKFLGHLSLDLLYTTLIDLVGLCSGGG 626

Query: 393 SH 394
             
Sbjct: 627 GQ 628


>Glyma17g12660.2 
          Length = 554

 Score =  306 bits (784), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 199/264 (75%), Gaps = 5/264 (1%)

Query: 26  QVFDMVNREAFNQSLGVNVTGIQENYLQLSISTGTSVFLSLVPSVEDEQTADGGGHQISE 85
           QVFD+VNREAFN   GV+VTGI+ENYLQLS+  GTSV+L+LV + +D  T +   +   E
Sbjct: 294 QVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQGTSVYLTLVSNSQDHSTVEDELNDNVE 353

Query: 86  TAVLPLDSIDEVKLPEEKHVYLHKKSRFPNRISCEIYLQQIFHEHVFLKAKDRPLPTGTR 145
            A+LPL+S D +K   +++    KK +F N I  EIY+QQIFHEH+F K  ++ + +G R
Sbjct: 354 NAILPLESSDGMKREAKQNT--SKKGQFSNSICYEIYIQQIFHEHIFGKGDEKAISSGNR 411

Query: 146 VSS-QLKDGSGLLGHFCMTVAHRIFSNKVLMELENVICKVPYLHLISHPTWHSRTSSWTI 204
           +S  Q +DGS LLGHF  ++AHRIFS KVL ELENV+CKVPYL LIS+PTW+SR SSWT+
Sbjct: 412 LSGVQARDGSSLLGHFFKSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWNSRASSWTL 471

Query: 205 FMKVPQSILHASSHSQTSDMKSMKSDIKTEFRTKVVVNDDSINVEAEGAPNVVGLFKGSS 264
           +M+VPQSIL   S ++TSD    K+  K +F TKVVVNDD INV+AEG+PNV GLFKG  
Sbjct: 472 YMEVPQSILRG-SQTKTSDYYE-KNAAKRQFWTKVVVNDDCINVKAEGSPNVAGLFKGKI 529

Query: 265 DDTCSMNKYDCDLADLPAIILQQV 288
           ++T S+NKY+C+LADLP IILQQV
Sbjct: 530 EETHSINKYNCNLADLPVIILQQV 553