Jatropha Genome Database

JcCB0060791.20

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060791.20 - phase: 2 /pseudo/partial
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g01230.1                                                       100   2e-22
Glyma07g29560.1                                                       100   6e-22

>Glyma20g01230.1 
          Length = 240

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 50/58 (86%)

Query: 13  MKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPR 70
           ++D+EVPWHLIAIAIFFTLIKLPGP YPYW RI +PH ANGVL RTL  A LW+RRP+
Sbjct: 175 LRDSEVPWHLIAIAIFFTLIKLPGPYYPYWVRIIIPHFANGVLLRTLLFAILWYRRPK 232


>Glyma07g29560.1 
          Length = 245

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 4/66 (6%)

Query: 13  MKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRK- 71
           ++DAE+PWHLIAIAIFFTLIKLPGP YPYW RI +PH ANGVL RTL  A LW RRP+  
Sbjct: 176 LRDAEIPWHLIAIAIFFTLIKLPGPYYPYWVRIIIPHFANGVLLRTLLFAILWHRRPKAL 235

Query: 72  ---GSG 74
              GSG
Sbjct: 236 KILGSG 241