Jatropha Genome Database

JcCB0059761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059761.10 - phase: 0 
         (411 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24950.1                                                       599   e-171
Glyma07g31470.1                                                       570   e-162
Glyma09g28510.1                                                       108   7e-24

>Glyma13g24950.1 
          Length = 440

 Score =  599 bits (1545), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/428 (71%), Positives = 338/428 (78%), Gaps = 29/428 (6%)

Query: 7   THSLAFRVMRLCKPSFHVDAPLRVDPADLIVGEDIFDDPIAASRLPPLIDGQVSNLTDTS 66
           +HSLAFRVMRLC+PSF+V+ PLR+DP DL VGED+FDDP A     P      +   D S
Sbjct: 12  SHSLAFRVMRLCRPSFNVEPPLRLDPTDLFVGEDLFDDPAAK----PHSFSSAAAHDDDS 67

Query: 67  DLTYRTRFLLQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRDVIIKAE 126
           D  YR RFLL+H SD+ GL+GLLVLPQ+FGAIYLGETFCSYISINNSSNFEVR+V+IKAE
Sbjct: 68  DPNYRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVLIKAE 127

Query: 127 IQTERQRILLLDTSKTPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLP 186
           IQTERQRILLLDTSK+PVETIRAGGRYDFIVEHDVKELG HTLVCTALYNDGDGERKYLP
Sbjct: 128 IQTERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLP 187

Query: 187 QFFKFIVANPLSVRT-----KETTYLEACIENHTKTSLYMDQVEFEPAQYWNAQILKADD 241
           QFFKFIVANPLSVRT     KETT+LEACIENHTK++L+MDQV+FEPAQY++A ILK D 
Sbjct: 188 QFFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSATILKGDG 247

Query: 242 NQSEKDSHTRETFKTPILIRSGGGIRNYLYQLRFSSNGSAQ-----SNVLGKLQITWRTN 296
           + SEKDS TRE FK PILIRSGGGI NYLYQL+  S+GS Q     SNVLGKLQITWRTN
Sbjct: 248 HHSEKDSPTREIFKPPILIRSGGGIYNYLYQLKTLSDGSPQTKVEGSNVLGKLQITWRTN 307

Query: 297 LGEPGRLQTQQILGNPITQKXXXXXXXXXXXXINLDKPFSVHLKLKNHTERELGPFEVWL 356
           LGEPGRLQTQQILG P T+K            INL KPF + L L N T+RELGPFEV L
Sbjct: 308 LGEPGRLQTQQILGTPATKKEIELQVVEVPSIINLQKPFMLKLNLTNQTDRELGPFEVGL 367

Query: 357 SQNDSLDEKAVMINGLQS---------------LNLIAIKLGVQKITGITVFDKKEKKTY 401
           SQN S  E+ VMINGLQS               LNLIA K G+Q+ITGITVFD +E K+Y
Sbjct: 368 SQNVSYGERVVMINGLQSMVLSEVQALGSTNFHLNLIATKPGIQRITGITVFDTREMKSY 427

Query: 402 DPLPDLEV 409
           +PLPDLE+
Sbjct: 428 EPLPDLEI 435


>Glyma07g31470.1 
          Length = 452

 Score =  570 bits (1469), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/445 (67%), Positives = 333/445 (74%), Gaps = 50/445 (11%)

Query: 7   THSLAFRVMRLCKPSFHVDAPLRVDPADLIVGEDIFDDPIAASRLPPLIDGQVSNLTDTS 66
           +HSLAFRVMRLC+PSF+V+ PLR+DPADL  GED+FDDP A    PP       + ++  
Sbjct: 11  SHSLAFRVMRLCRPSFNVEPPLRLDPADLFAGEDLFDDPAAN---PPSFSSSDDSDSN-- 65

Query: 67  DLTYRTRFLLQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRDVIIKAE 126
              YR RFLL+H SD+ GL+GLLVLPQ+FGAIYLGETFCSYISINNSSNFEVRDVIIKAE
Sbjct: 66  ---YRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDVIIKAE 122

Query: 127 IQTERQRILLLDTSKTPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLP 186
           IQTER RILLLDTSK+PVETIRAGGRYDFIVEHDVKELG HTLVCTALYNDGDGERKYLP
Sbjct: 123 IQTERLRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLP 182

Query: 187 QFFKFIVANPLSVRT-----KETTYLEACIENHTKTSLYMDQVEFEPAQYWNAQILKADD 241
           QFFKFIVANPLSVRT     KETT+LEACIENHTK++L+MDQV+FEPAQY++A ILK D 
Sbjct: 183 QFFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSASILKGDG 242

Query: 242 NQSEKDS-------------HTRETF----KTPILIRSGGGIRNYLYQLRFSSNGSAQ-- 282
           + SEKDS             H    F      PILIRSGGGI NYLYQL+ SS+G  Q  
Sbjct: 243 HHSEKDSPTSIRIQQIPNFGHYSRYFLGSSSPPILIRSGGGIYNYLYQLKTSSDGLPQTK 302

Query: 283 ---SNVLGKLQITWRTNLGEPGRLQTQQILGNPITQKXXXXXXXXXXXXINLDKPFSVHL 339
              SNVLGKLQITWRTNLGEPGRLQTQQILG   T+K            INL  PF + L
Sbjct: 303 VEGSNVLGKLQITWRTNLGEPGRLQTQQILGTTATKKEIELQVVEVPSIINLQNPFMLKL 362

Query: 340 KLKNHTERELGPFEVWLSQNDSLDEKAVMINGLQS---------------LNLIAIKLGV 384
            L N T+RELGPFEV LSQN S  E+AVMINGLQS               LNLIA K G+
Sbjct: 363 NLTNQTDRELGPFEVSLSQNVSYGERAVMINGLQSMVLSEVQALGSTNFHLNLIATKPGI 422

Query: 385 QKITGITVFDKKEKKTYDPLPDLEV 409
           Q+ITGITVFD +E K+Y+PLPDLE+
Sbjct: 423 QRITGITVFDTREMKSYEPLPDLEI 447


>Glyma09g28510.1 
          Length = 177

 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 69/103 (66%), Gaps = 13/103 (12%)

Query: 6   GTHSLAFRVMRLCKPSFHVDAPLRVDPADLIVGEDIFDDPIAASRLPPLIDGQVSNLTDT 65
           G+HSL FRVMRLC+PSF+++ P R++PA+L      FDDP A     PL     +     
Sbjct: 3   GSHSLVFRVMRLCRPSFNIEPPFRLNPANL------FDDPAAK----PLSFSSAATHNGE 52

Query: 66  SDLTYRTRFLLQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYI 108
           SD  YR RFLL+H SD+ GL+GLLVLPQ   AIYLGET CSYI
Sbjct: 53  SDPNYRNRFLLRHFSDAIGLSGLLVLPQ---AIYLGETLCSYI 92