Jatropha Genome Database

JcCB0059731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059731.10 + phase: 0 /partial
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53370.1                                                       278   5e-75
Glyma08g48120.1                                                       274   7e-74
Glyma13g07660.1                                                       255   4e-68
Glyma19g06740.1                                                       161   7e-40
Glyma10g12720.1                                                       134   1e-31
Glyma02g33880.1                                                       127   1e-29
Glyma10g22050.1                                                       121   8e-28

>Glyma18g53370.1 
          Length = 421

 Score =  278 bits (710), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 131/242 (54%), Positives = 172/242 (71%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK VL  VPE+ ELVG +N    L  ++QD + KVK +L+ +F+ L+S+S++++ + ++
Sbjct: 157 ELKGVLHTVPEIVELVGATNTNLVLQTNDQDGEEKVKPVLQAVFTDLMSASKDRVTDAVN 216

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           ++K RL  E + R+LTDKEQLVLRLE QYPAD GVIAAF LN+VKLN GEAL+LGANEPH
Sbjct: 217 RLKSRLLKESEVRQLTDKEQLVLRLEKQYPADVGVIAAFFLNHVKLNPGEALFLGANEPH 276

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AY++GEC+ECMA SDNVVR GLT K RD+QTL +ML Y+QG PEIL+GVS+NPY  +Y P
Sbjct: 277 AYLSGECVECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILRGVSVNPYVNKYTP 336

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P +EFE+D  ++P+               L  +G GT+  G  K     EG+VLF  A T
Sbjct: 337 PFEEFEIDRCILPQGETVVFPAVPGPSIFLVTVGEGTMNTGLPKGHVVTEGDVLFAAANT 396

Query: 251 EI 252
           EI
Sbjct: 397 EI 398


>Glyma08g48120.1 
          Length = 421

 Score =  274 bits (701), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 170/242 (70%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK VL  VPE+ ELVG +N    L  ++QD + KVK +L+ +F+ L+S+ ++++ + ++
Sbjct: 157 ELKGVLHTVPEIVELVGATNTNLVLQTNDQDGEEKVKPVLQAVFTDLMSACKDRVTDAVN 216

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           ++K RL  E + R+LTDKEQLVL+LE QYPAD GVIAAF LN+VKLN GEAL+LGANEPH
Sbjct: 217 RLKSRLLKESEVRQLTDKEQLVLQLEKQYPADVGVIAAFFLNHVKLNPGEALFLGANEPH 276

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AY++GEC+ECMA SDNVVR GLT K RD+QTL +ML Y+QG PEIL GVS+NPY  +Y P
Sbjct: 277 AYLSGECVECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILHGVSVNPYVNKYTP 336

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P +EFE+D  ++P+               L  +G GT+  G  K     EG+VLF  A T
Sbjct: 337 PFEEFEIDRCILPQGETVVFPAVPGPSIFLVTVGEGTMNTGSPKGHVVTEGDVLFAAANT 396

Query: 251 EI 252
           EI
Sbjct: 397 EI 398


>Glyma13g07660.1 
          Length = 449

 Score =  255 bits (651), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 126/242 (52%), Positives = 163/242 (67%), Gaps = 1/242 (0%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK VL  VPE+ ELV   N    L  +++D + KVK IL+ +F+ ++S+ +E++   + 
Sbjct: 186 ELKAVL-TVPEVVELVVAENVNSVLQITDEDGEEKVKPILKSLFTDIMSAGKERVAGAVD 244

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           +++ RLH E Q R+LT+KEQLVLRLE QYP+D GVIAAF LN+VKL  GEAL+LGANEPH
Sbjct: 245 RLRSRLHKESQVRQLTEKEQLVLRLEKQYPSDVGVIAAFFLNHVKLAPGEALFLGANEPH 304

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AYI GECIECMA SDNVVR GLT K RD+QTL +ML Y+QG PEIL+GV +N Y  +Y+P
Sbjct: 305 AYICGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGSPEILRGVPINQYVNKYIP 364

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P +EFE+D  ++P+               L  +G G +     K     EG VLFV A T
Sbjct: 365 PFEEFEIDCCILPQGEKVVFPAVPGPSIFLVTVGEGMMTTESPKGYPITEGHVLFVAANT 424

Query: 251 EI 252
           EI
Sbjct: 425 EI 426


>Glyma19g06740.1 
          Length = 273

 Score =  161 bits (407), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 17/160 (10%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK VL  VPE+ ELVG  N    L  +++D + KVKAIL+ +F+ ++S S+E +   + 
Sbjct: 131 ELKAVL-TVPEVVELVGVENVNLVLQITDEDGEEKVKAILQSLFTDVMSESKESVTGAVD 189

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           K++ RLH E Q                QYP+D GVIAAF LN+VKL   EAL+LGANEPH
Sbjct: 190 KLRNRLHKESQ----------------QYPSDVGVIAAFFLNHVKLAPDEALFLGANEPH 233

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQ 170
           AYI GECI C A SDNVVR GLT K RD+QTL +ML Y+Q
Sbjct: 234 AYIYGECIACKATSDNVVRAGLTPKHRDVQTLCSMLTYKQ 273


>Glyma10g12720.1 
          Length = 180

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 70/86 (81%)

Query: 85  LTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPHAYIAGECIECMANS 144
           LTDK+Q+VL LE Q P+D GVI AF +N+VK+   EAL+LGANEPHAYI GECIECMA S
Sbjct: 41  LTDKDQMVLWLEKQCPSDVGVIVAFFVNHVKVAPDEALFLGANEPHAYICGECIECMATS 100

Query: 145 DNVVRVGLTSKRRDIQTLLAMLEYRQ 170
           DNVVR GLT K RD+Q+L +ML Y+Q
Sbjct: 101 DNVVRAGLTPKHRDVQSLCSMLTYKQ 126


>Glyma02g33880.1 
          Length = 95

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 70/94 (74%), Gaps = 9/94 (9%)

Query: 78  LEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPHAYIAGEC 137
           L  + R+LTDKEQLVL LE QYP+D GVIAAF +N+VKL   EAL+LGANEPHAYI GEC
Sbjct: 1   LHHRVRQLTDKEQLVLWLEKQYPSDVGVIAAFFVNHVKLAPDEALFLGANEPHAYICGEC 60

Query: 138 I---------ECMANSDNVVRVGLTSKRRDIQTL 162
           I         ECMA SDNVVR GLT K RD+QTL
Sbjct: 61  IEFYENWDATECMATSDNVVRAGLTPKHRDVQTL 94


>Glyma10g22050.1 
          Length = 79

 Score =  121 bits (303), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 55/78 (70%), Positives = 64/78 (82%)

Query: 85  LTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPHAYIAGECIECMANS 144
           LTDK+Q+VL LE Q P+D GVI AF +N+VK+   EAL+LGANEPHAYI GECIECMA S
Sbjct: 1   LTDKDQMVLWLEKQCPSDVGVIVAFFVNHVKVAPDEALFLGANEPHAYICGECIECMATS 60

Query: 145 DNVVRVGLTSKRRDIQTL 162
           DNVVR GLT K RD+Q+L
Sbjct: 61  DNVVRAGLTPKHRDVQSL 78