Jatropha Genome Database

JcCB0059061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059061.10 + phase: 0 /partial
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g26450.1                                                       238   5e-63
Glyma20g17660.1                                                       236   2e-62

>Glyma10g26450.1 
          Length = 975

 Score =  238 bits (606), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 135/237 (56%), Positives = 168/237 (70%), Gaps = 9/237 (3%)

Query: 1   MGTEYVNGQTKPTWRLIDGICKESLAFETAKKEGIPETIVQRAEELYFSAYAKKVSPERI 60
           MGT  ++GQ  PTW+L DG+CKESLAFETAK+EGIPE IV+RAE LY   YAK++     
Sbjct: 748 MGTTSIDGQIMPTWKLTDGVCKESLAFETAKREGIPEHIVRRAEYLYQLVYAKEMLFAEN 807

Query: 61  EERKRPIHSSGTVNGSNEAHFALTEATARALHHDTKSAKEMEVMQKKDVESAVTLICQRK 120
              +    +   VN  N  H      + R L      A +MEV+ +++VE AVT+ICQ  
Sbjct: 808 FPNEEKFSTCINVNNLNGTHLH----SKRFL----SGANQMEVL-REEVERAVTVICQDH 858

Query: 121 LIELYKQKNTAELETVQCVAIGAREQPPPSTIGASCVYIMFRPDKRLYVGVTDDLEGRVH 180
           + +L  +K   EL  ++C+ IG RE PPPS +G+S VY+MFRPDK+LYVG TDDLEGRV 
Sbjct: 859 IKDLKCKKIALELTEIKCLIIGTRELPPPSVVGSSSVYVMFRPDKKLYVGETDDLEGRVR 918

Query: 181 AHRSKEGMYNASFLYFIVKGKSIACQLETLLINQLPRKGFQLSNIADGKHRNFGTSN 237
            HR KEGM++ASFLYF+V GKS+ACQ E+LLINQL  +GFQLSNIADGKHRNFGTSN
Sbjct: 919 RHRLKEGMHDASFLYFLVPGKSLACQFESLLINQLSGQGFQLSNIADGKHRNFGTSN 975


>Glyma20g17660.1 
          Length = 665

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 170/238 (71%), Gaps = 28/238 (11%)

Query: 1   MGTEYVNGQTKPTWRLIDGICKESLAFETAKKEGIPETIVQRAEELYFSAYAKKVSPERI 60
           MGT  ++GQT PTW+L DG+C+ESLAFETA++EG+PE I++RAE +Y S YAK+   E +
Sbjct: 455 MGTTSIDGQTIPTWKLTDGVCRESLAFETARREGVPELIIRRAEYIYQSVYAKE--KELL 512

Query: 61  EERKRPIHSSGTVNGSNEAHFALTEATARALHHDTKSAKEMEVMQKKDVESAVTLICQRK 120
              K           SNE  F                A + EV+ +++VESAVT+ICQ  
Sbjct: 513 SAEK----------SSNEKKF-------------LSGANQTEVL-REEVESAVTVICQDH 548

Query: 121 LIELYKQKNTA-ELETVQCVAIGAREQPPPSTIGASCVYIMFRPDKRLYVGVTDDLEGRV 179
           ++E  K KN A EL  ++C+ I  REQPPPS +G+S VY+MFRPDK+LYVG TDDLEGRV
Sbjct: 549 IME-QKSKNIALELTGIKCLQIRTREQPPPSVVGSSSVYVMFRPDKKLYVGETDDLEGRV 607

Query: 180 HAHRSKEGMYNASFLYFIVKGKSIACQLETLLINQLPRKGFQLSNIADGKHRNFGTSN 237
            AHR KEGM++ASFLYF+V GKS+ACQLE+LLINQL  +GFQL+N ADGKHRNFGTSN
Sbjct: 608 RAHRLKEGMHDASFLYFLVPGKSLACQLESLLINQLSSRGFQLTNTADGKHRNFGTSN 665