Jatropha Genome Database

JcCB0058551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058551.10 - phase: 0 
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g39910.1                                                       164   2e-41
Glyma01g03880.1                                                       159   7e-40
Glyma02g03810.1                                                       157   2e-39
Glyma18g18550.1                                                       127   2e-30
Glyma19g01410.1                                                       103   4e-23
Glyma18g49200.1                                                        79   9e-16
Glyma13g34350.1                                                        63   9e-11

>Glyma08g39910.1 
          Length = 515

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/114 (74%), Positives = 94/114 (82%), Gaps = 6/114 (5%)

Query: 22  VSSAPSTASPAKIVSGYFSNAVSAFMKWLWSLKATTKTAITGRPTMKFESGYTVETVFDG 81
           VS+APS  SPAKIVSG+ SNAV AF KW+WSLKATTKTA++ R  MKFESGY VETVFDG
Sbjct: 18  VSAAPSATSPAKIVSGFLSNAVPAFTKWVWSLKATTKTAVSSRSMMKFESGYNVETVFDG 77

Query: 82  SKLGIEPYSVEVLPGGELLILDSANSNIYRISSSLSL--CKW----VLAIAWIL 129
           SKLGIEPY+VEVLP GELLILDSANSNIYRISSSLSL  C++    +  I W L
Sbjct: 78  SKLGIEPYAVEVLPNGELLILDSANSNIYRISSSLSLYCCQFEFDPLHHIFWCL 131


>Glyma01g03880.1 
          Length = 507

 Score =  159 bits (402), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 80/98 (81%), Positives = 86/98 (87%)

Query: 21  DVSSAPSTASPAKIVSGYFSNAVSAFMKWLWSLKATTKTAITGRPTMKFESGYTVETVFD 80
           + S+APST  PAKIVSG+ SNAV AF KW+WSLKA TKTAI  +  MKFESGYTVETVFD
Sbjct: 18  NASAAPSTTLPAKIVSGFLSNAVPAFTKWVWSLKAPTKTAIGAKSMMKFESGYTVETVFD 77

Query: 81  GSKLGIEPYSVEVLPGGELLILDSANSNIYRISSSLSL 118
           GSKLGIEPY+VEVLP GELLILDSANSNIYRISSSLSL
Sbjct: 78  GSKLGIEPYAVEVLPNGELLILDSANSNIYRISSSLSL 115


>Glyma02g03810.1 
          Length = 509

 Score =  157 bits (398), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 79/98 (80%), Positives = 85/98 (86%)

Query: 21  DVSSAPSTASPAKIVSGYFSNAVSAFMKWLWSLKATTKTAITGRPTMKFESGYTVETVFD 80
           + S+APST  PAKIVSG+ SNAV AF KW+WSLKA TKTAI  +  MKFESGYTVETVFD
Sbjct: 18  NASAAPSTTLPAKIVSGFLSNAVPAFTKWVWSLKAPTKTAIGAKSMMKFESGYTVETVFD 77

Query: 81  GSKLGIEPYSVEVLPGGELLILDSANSNIYRISSSLSL 118
           GSKLGIEPY+VEVL  GELLILDSANSNIYRISSSLSL
Sbjct: 78  GSKLGIEPYAVEVLANGELLILDSANSNIYRISSSLSL 115


>Glyma18g18550.1 
          Length = 453

 Score =  127 bits (320), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/70 (87%), Positives = 65/70 (92%)

Query: 49  WLWSLKATTKTAITGRPTMKFESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSN 108
           W+WSLKATTKTA++ R  MKFESGY VETVFDGSKLGIEPY+VEVLP GELLILDSANSN
Sbjct: 1   WVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYAVEVLPNGELLILDSANSN 60

Query: 109 IYRISSSLSL 118
           IYRISSSLSL
Sbjct: 61  IYRISSSLSL 70


>Glyma19g01410.1 
          Length = 536

 Score =  103 bits (258), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 58/99 (58%), Positives = 74/99 (74%), Gaps = 4/99 (4%)

Query: 23  SSAPSTASPAKIVSGYFSNAVSAFMKWLWSL--KATTKTAIT--GRPTMKFESGYTVETV 78
           S   +T  PAK+V+G  SN VSA +KWLWSL  K+TTK       R  +KFESGY+VET+
Sbjct: 20  SPTSATPPPAKVVTGVVSNVVSALIKWLWSLSVKSTTKPGRVQHSRSMVKFESGYSVETI 79

Query: 79  FDGSKLGIEPYSVEVLPGGELLILDSANSNIYRISSSLS 117
           FDGS+LGIEP+SV++ P GE L+LDS NSNIY++S S+S
Sbjct: 80  FDGSQLGIEPHSVKISPNGEFLVLDSENSNIYKVSGSMS 118


>Glyma18g49200.1 
          Length = 220

 Score = 79.3 bits (194), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 3/61 (4%)

Query: 59  TAITGRPTMKFESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNIYRISSSLSL 118
            +I  +  MKFESGY+VE VFDGS+LGIEPY+VEVLP GELLILDSAN  +    S L +
Sbjct: 107 QSIGAKSMMKFESGYSVEIVFDGSELGIEPYAVEVLPNGELLILDSANRCLL---SHLFI 163

Query: 119 C 119
           C
Sbjct: 164 C 164


>Glyma13g34350.1 
          Length = 503

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 8/92 (8%)

Query: 27  STASPAKIVSGYFSNAVSAFMKWLWSLKATTKTAITGRPTMKFESGYTVETVFDGSKLGI 86
           S A+PA    G     +S+ +KW    ++T+KT  +    ++FE+GY VETV +G+++G+
Sbjct: 24  SHAAPA----GPLIKHISSLIKWT---RSTSKTPHSDGNVLQFENGYVVETVVEGNEIGV 76

Query: 87  EPYSVEVL-PGGELLILDSANSNIYRISSSLS 117
            PY + V    GEL  +D+ NSNI RI+  LS
Sbjct: 77  VPYRIRVSEEDGELFAVDAINSNIVRITPPLS 108