Jatropha Genome Database

JcCB0058331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058331.10 + phase: 0 /partial
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23250.1                                                       124   3e-29
Glyma10g43550.1                                                       122   6e-29

>Glyma20g23250.1 
          Length = 605

 Score =  124 bits (310), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/67 (82%), Positives = 61/67 (91%)

Query: 1   MRIIAIALSPVAPSLSWRIYAQLGYSQDHFNSITWSETKWGGLKGGQVMAQPKPVFARIE 60
           +RIIAIAL PV PSLSWRIYAQLGYS+D F++ TW +TKWGGLKGGQVMAQPKPVFARIE
Sbjct: 515 VRIIAIALFPVTPSLSWRIYAQLGYSRDQFDAATWRDTKWGGLKGGQVMAQPKPVFARIE 574

Query: 61  NKTETED 67
           N+TE ED
Sbjct: 575 NQTEVED 581


>Glyma10g43550.1 
          Length = 605

 Score =  122 bits (307), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1   MRIIAIALSPVAPSLSWRIYAQLGYSQDHFNSITWSETKWGGLKGGQVMAQPKPVFARIE 60
           +RIIAIAL PV PSLSWRIYAQLGYS+D F++ TW +T+WGGLKGGQVMAQPKPVFARIE
Sbjct: 515 VRIIAIALFPVTPSLSWRIYAQLGYSRDQFDAATWRDTEWGGLKGGQVMAQPKPVFARIE 574

Query: 61  NKTETED 67
           N+TE ED
Sbjct: 575 NQTEVED 581