Jatropha Genome Database

JcCB0058191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058191.20 - phase: 0 /partial/short
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27210.1                                                        82   1e-16
Glyma02g08180.1                                                        81   3e-16
Glyma02g16010.2                                                        60   7e-10
Glyma02g16010.1                                                        60   7e-10
Glyma10g03740.2                                                        60   7e-10
Glyma10g03740.3                                                        60   8e-10
Glyma10g03740.1                                                        60   8e-10

>Glyma16g27210.1 
          Length = 501

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 2/51 (3%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV--TAGNKPKTNL 49
           GIAVA+K GATKAQFDSTVGIHPSAAEEFVTMRS++RRV  T   KPKTNL
Sbjct: 451 GIAVALKCGATKAQFDSTVGIHPSAAEEFVTMRSVTRRVAGTGSVKPKTNL 501


>Glyma02g08180.1 
          Length = 501

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 45/51 (88%), Gaps = 2/51 (3%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV--TAGNKPKTNL 49
           GIA+A++ GATKAQFDSTVGIHPSAAEEFVTMRS++RRV  T   KPKTNL
Sbjct: 451 GIAIALQCGATKAQFDSTVGIHPSAAEEFVTMRSVTRRVAGTGSAKPKTNL 501


>Glyma02g16010.2 
          Length = 545

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV 39
           G AVA+K+  TKA FD+TVGIHPSAAEEFVTMR+ +R++
Sbjct: 487 GFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKI 525


>Glyma02g16010.1 
          Length = 545

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV 39
           G AVA+K+  TKA FD+TVGIHPSAAEEFVTMR+ +R++
Sbjct: 487 GFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKI 525


>Glyma10g03740.2 
          Length = 543

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV 39
           G AVA+K+  TKA FD+TVGIHPSAAEEFVTMR+ +R++
Sbjct: 487 GFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKI 525


>Glyma10g03740.3 
          Length = 545

 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV 39
           G AVA+K+  TKA FD+TVGIHPSAAEEFVTMR+ +R++
Sbjct: 487 GFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKI 525


>Glyma10g03740.1 
          Length = 545

 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRV 39
           G AVA+K+  TKA FD+TVGIHPSAAEEFVTMR+ +R++
Sbjct: 487 GFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKI 525