Jatropha Genome Database

JcCB0057531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0057531.10 + phase: 0 
         (414 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g06890.1                                                        61   3e-09
Glyma07g39560.1                                                        60   4e-09
Glyma02g04720.1                                                        55   1e-07

>Glyma16g06890.1 
          Length = 405

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 131/338 (38%), Gaps = 67/338 (19%)

Query: 40  DCISNILIRLPLESLQSSRFVCKPWYNIINSPIFIDAHLRRSESVLIFLESVQNERYPYL 99
           + +SN+L RLP + L   + VCK W+++I  P F+  +     S+       Q E    +
Sbjct: 9   ELVSNVLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSL-----QSQEEHLLVI 63

Query: 100 ERSMPTQKPNYFSVESSFLQSKPVPIFGQPVNTLPKFRIQFLEFKEGKSKVTEYKVSCLG 159
            R   +    Y SV  S+  + P       V   P       E+       TE    C G
Sbjct: 64  RRPFFSGLKTYISV-LSWNTNDPKKHVSSDVLNPP------YEYNSDHKYWTEILGPCNG 116

Query: 160 LIRATCNXXXXXXXXXXXXXXXVMNPVTRKLMALPLGTIYPPQ-----NESYGFALSNTT 214
           +     N               +MNP   +  ALP      P       +  GF     T
Sbjct: 117 IYFLEGNPNV------------LMNPSLGEFKALPKSHFTSPHGTYTFTDYAGFGFDPKT 164

Query: 215 GEYKVVHLFRD---------ELGYVSCEILNIGTRFWREVNGPS--------FGLFGWFG 257
            +YKVV + +D         E+GY S E+ ++ +  WR+++ PS        +G    F 
Sbjct: 165 NDYKVV-VLKDLWLKETDEREIGYWSAELYSLNSNSWRKLD-PSLLPLPIEIWGSSRVFT 222

Query: 258 YEPVSAIGALHWVPQVDHN----DYIVSMEVDNEKFHTIRLPENCRTYDRII-------E 306
           Y    A    HW   V+ +    D +++ ++  E F  IR+P+   + D          E
Sbjct: 223 Y----ANNCCHWWGFVEDSGATQDIVLAFDMVKESFRKIRVPKVRDSSDEKFATLVPFEE 278

Query: 307 MAGLLCLVV---HEELNIDIWNLKSI-GEGVWTKQYSI 340
            A +  LV      E + D+W +K    EG W KQYS+
Sbjct: 279 SASIGVLVYPVRGAEKSFDVWVMKDYWDEGSWVKQYSV 316


>Glyma07g39560.1 
          Length = 385

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 62/319 (19%)

Query: 40  DCISNILIRLPLESLQSSRFVCKPWYNIINSPIFIDAHLRRSESVLIFLESVQNERYPY- 98
           + ++ IL RLP++S+   R  CK W +II+S  F+  HL +S S LI    +++  + Y 
Sbjct: 8   EVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFVLFHLNKSHSSLI----LRHRSHLYS 63

Query: 99  LERSMPTQKPNYFSVESSFLQSKPVPIFGQPVNTLPKFRIQFLEFKEGKSKVTEYKVSCL 158
           L+   P Q P    VE     S P+  +   +  L            G S          
Sbjct: 64  LDLKSPEQNP----VE----LSHPLMCYSNSIKVL------------GSSN--------- 94

Query: 159 GLIRATCNXXXXXXXXXXXXXXXVMNPVTRKLMALPLGTIYPPQN-----ESYGFALSNT 213
           GL+  +                 + NP  RK   LP    + PQ+       YGF   + 
Sbjct: 95  GLLCIS----------NVADDIALWNPFLRKHRILPADRFHRPQSSLFAARVYGFGHHSP 144

Query: 214 TGEYKVVHL-----FRDELGYVSCEILNIGTRFWREVNGPSFGLFGWFGYEPVSAIGALH 268
           + +YK++ +      +        ++  + +  W+ +    + L        V   G+LH
Sbjct: 145 SNDYKLLSITYFVDLQKRTFDSQVQLYTLKSDSWKNLPSMPYALCC-ARTMGVFVSGSLH 203

Query: 269 WVP----QVDHNDYIVSMEVDNEKFHTIRLPENCR-TYD-RIIEMAGLLCLVVHEELNID 322
           W+     Q    D IVS ++  E FH + LP      +D ++  + G LC+V H     D
Sbjct: 204 WLVTRKLQPHEPDLIVSFDLTRETFHEVPLPVTVNGDFDMQVALLGGCLCVVEHRGTGFD 263

Query: 323 IWNLKSIG-EGVWTKQYSI 340
           +W ++  G    W K +++
Sbjct: 264 VWVMRVYGSRNSWEKLFTL 282


>Glyma02g04720.1 
          Length = 423

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 137/370 (37%), Gaps = 69/370 (18%)

Query: 32  QNVPYFHKDCISNILIRLPLESLQSSRFVCKPWYNIINSPIFIDAHLRR-SESVLIFLES 90
           ++ P   +D I  IL  + +++L   R V K W ++I +P FI  HL+R S+++ I L  
Sbjct: 5   EDAPVLPEDLIVEILSWVEVKNLMRFRCVSKSWNSLIFNPTFIKLHLQRSSQNIHILLTF 64

Query: 91  VQNERYPYLERSMPTQKPNYFSVESSFLQSKPVPI---FGQPVNTLPKFRIQFLEFKEGK 147
            Q+   PY     P    NY SV ++     P  I      P +T+    + FLE +   
Sbjct: 65  DQDSSNPY-----PYHDDNYISVVAA-----PCSIQRLLENPSSTIYNI-VHFLEAQSTS 113

Query: 148 SKVTEYKVSC---------LGLIRA-TCNXXXXXXXXXXXXXXXVMNPVTRKLMA----- 192
           S  T Y   C         LG+     C                  NP TR + A     
Sbjct: 114 SSSTIYFDVCYRFKHTYLFLGVCNGLVCLLDCLYEDEFEEYWVRFWNPATRAMSADSPHL 173

Query: 193 ------LPLGTIYPPQNESYGFALSNTTGEYKV---------------VHLFRDELGY-- 229
                   LG I       + F   +++  YKV               VH   D+ G+  
Sbjct: 174 RVHSSNYKLGDI----AVKHAFGYDDSSDTYKVLAILFNVKSQDWELRVHCMGDDTGWRN 229

Query: 230 -VSCEILNIGTRFWREVNGPSFGLFGWFGYEPVSAIGALHWVPQVDHNDYIVSMEVDNEK 288
            ++C    I  + + +      G   W   +  S      W         I S ++ NE 
Sbjct: 230 VLTCSAFPILQQVYGQFVS---GTLNWLALDNSSGSDHYQWETVTVDQLVIFSYDLKNET 286

Query: 289 FHTIRLPENCR--TYDR--IIEMAGLLCLV-VHEELNIDIWNLKSIG-EGVWTKQYSIT- 341
           +  + +P+     + D   +  + G LCL   H   N+ +W ++  G E  WT+  +++ 
Sbjct: 287 YSYLSMPDGLSEISLDEPYLGVLNGCLCLSHDHRRTNLVVWLMREFGAEKSWTQLLNVSY 346

Query: 342 -RGSVLDMVP 350
               VLD  P
Sbjct: 347 HHLQVLDFPP 356