Jatropha Genome Database

JcCB0053361.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053361.20 + phase: 0 /partial
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g12660.2                                                       225   2e-59
Glyma07g12660.1                                                       224   3e-59
Glyma03g24280.3                                                       220   5e-58
Glyma03g24280.2                                                       220   5e-58
Glyma03g24280.1                                                       220   7e-58
Glyma05g06110.1                                                       206   1e-53
Glyma17g16400.4                                                       203   9e-53
Glyma17g16400.1                                                       203   9e-53
Glyma17g16400.3                                                       200   5e-52
Glyma17g16400.2                                                       196   9e-51

>Glyma07g12660.2 
          Length = 396

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 126/150 (84%), Gaps = 4/150 (2%)

Query: 23  RFPLRHGVRCNVVEPLNFDNGKPCVP--LLSPSAQSFPSFL-ASNTDLESCIANKHYTRL 79
           R  LR+GVRC  +E +N +NG+P     L+S S  + P ++ A NT ++  + N++ TRL
Sbjct: 28  RISLRNGVRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLV-NRNDTRL 86

Query: 80  RIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPAN 139
           RIFSGTANPAL+QEIACY+GLELGK KIKRFADGEIYVQLQESVRGCDV+LVQPTCPPAN
Sbjct: 87  RIFSGTANPALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPAN 146

Query: 140 ENLMELLIMIDACRRASAKNITAVIPYFGY 169
           ENLMELLIMIDACRRASAKNITAVIPYFGY
Sbjct: 147 ENLMELLIMIDACRRASAKNITAVIPYFGY 176


>Glyma07g12660.1 
          Length = 402

 Score =  224 bits (572), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 126/150 (84%), Gaps = 4/150 (2%)

Query: 23  RFPLRHGVRCNVVEPLNFDNGKPCVP--LLSPSAQSFPSFL-ASNTDLESCIANKHYTRL 79
           R  LR+GVRC  +E +N +NG+P     L+S S  + P ++ A NT ++  + N++ TRL
Sbjct: 28  RISLRNGVRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLV-NRNDTRL 86

Query: 80  RIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPAN 139
           RIFSGTANPAL+QEIACY+GLELGK KIKRFADGEIYVQLQESVRGCDV+LVQPTCPPAN
Sbjct: 87  RIFSGTANPALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPAN 146

Query: 140 ENLMELLIMIDACRRASAKNITAVIPYFGY 169
           ENLMELLIMIDACRRASAKNITAVIPYFGY
Sbjct: 147 ENLMELLIMIDACRRASAKNITAVIPYFGY 176


>Glyma03g24280.3 
          Length = 397

 Score =  220 bits (561), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/149 (70%), Positives = 122/149 (81%), Gaps = 2/149 (1%)

Query: 23  RFPLRHGVRCNVVEPLNFDNGKPCVP--LLSPSAQSFPSFLASNTDLESCIANKHYTRLR 80
           R  LR+GVR   +E +  +NG+P     ++S S  + PS++ +       + N++ TRLR
Sbjct: 30  RISLRNGVRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLR 89

Query: 81  IFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANE 140
           IFSGTANPAL+QEIACY+GLELGKIKIKRFADGEIYVQLQESVRGCDV+LVQPTCPPANE
Sbjct: 90  IFSGTANPALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANE 149

Query: 141 NLMELLIMIDACRRASAKNITAVIPYFGY 169
           NLMELLIMIDACRRASAKNITAVIPYFGY
Sbjct: 150 NLMELLIMIDACRRASAKNITAVIPYFGY 178


>Glyma03g24280.2 
          Length = 398

 Score =  220 bits (561), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/149 (70%), Positives = 122/149 (81%), Gaps = 2/149 (1%)

Query: 23  RFPLRHGVRCNVVEPLNFDNGKPCVP--LLSPSAQSFPSFLASNTDLESCIANKHYTRLR 80
           R  LR+GVR   +E +  +NG+P     ++S S  + PS++ +       + N++ TRLR
Sbjct: 30  RISLRNGVRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLR 89

Query: 81  IFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANE 140
           IFSGTANPAL+QEIACY+GLELGKIKIKRFADGEIYVQLQESVRGCDV+LVQPTCPPANE
Sbjct: 90  IFSGTANPALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANE 149

Query: 141 NLMELLIMIDACRRASAKNITAVIPYFGY 169
           NLMELLIMIDACRRASAKNITAVIPYFGY
Sbjct: 150 NLMELLIMIDACRRASAKNITAVIPYFGY 178


>Glyma03g24280.1 
          Length = 404

 Score =  220 bits (560), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 105/149 (70%), Positives = 122/149 (81%), Gaps = 2/149 (1%)

Query: 23  RFPLRHGVRCNVVEPLNFDNGKPCVP--LLSPSAQSFPSFLASNTDLESCIANKHYTRLR 80
           R  LR+GVR   +E +  +NG+P     ++S S  + PS++ +       + N++ TRLR
Sbjct: 30  RISLRNGVRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLR 89

Query: 81  IFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANE 140
           IFSGTANPAL+QEIACY+GLELGKIKIKRFADGEIYVQLQESVRGCDV+LVQPTCPPANE
Sbjct: 90  IFSGTANPALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANE 149

Query: 141 NLMELLIMIDACRRASAKNITAVIPYFGY 169
           NLMELLIMIDACRRASAKNITAVIPYFGY
Sbjct: 150 NLMELLIMIDACRRASAKNITAVIPYFGY 178


>Glyma05g06110.1 
          Length = 393

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 103/154 (66%), Positives = 121/154 (78%), Gaps = 5/154 (3%)

Query: 17  FVTKQR-RFPLRHGVRCNVVEPLNFDNGKPCVPLLSPSAQSFPSFLASNTDLESCIANKH 75
           FV   R R    + V+C++ E  NF NGKP +P+L+   ++ P F+ S  + ++   N +
Sbjct: 24  FVDHSRARISAPYTVKCDMSESSNFVNGKPIIPVLNE--RTLPKFMESAREAKAVSRNSN 81

Query: 76  YTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTC 135
             RL++FSGTANP LSQEIA YMGLELGKI IKRFADGEIYVQLQESVRGC+VYL+QPTC
Sbjct: 82  --RLKLFSGTANPTLSQEIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTC 139

Query: 136 PPANENLMELLIMIDACRRASAKNITAVIPYFGY 169
           PPANENLMEL IMIDACRRASAKNITAVIPYFGY
Sbjct: 140 PPANENLMELKIMIDACRRASAKNITAVIPYFGY 173


>Glyma17g16400.4 
          Length = 337

 Score =  203 bits (516), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 120/154 (77%), Gaps = 5/154 (3%)

Query: 17  FVTKQR-RFPLRHGVRCNVVEPLNFDNGKPCVPLLSPSAQSFPSFLASNTDLESCIANKH 75
           FV   R R    + V+C++ E  NF NGKP +P+L+   ++ P F+ S    E+   +++
Sbjct: 37  FVDHSRARISAPNTVKCDMSESSNFVNGKPIIPVLNE--RTLPKFMESAR--EAKTVSRN 92

Query: 76  YTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTC 135
             RL++FSG ANP LSQEIA YMGLELGKI IKRFADGEIYVQLQESVRGC+VYL+QPTC
Sbjct: 93  SNRLKLFSGRANPTLSQEIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTC 152

Query: 136 PPANENLMELLIMIDACRRASAKNITAVIPYFGY 169
           PPANENLMEL IMIDACRRASAKNITAVIPYFGY
Sbjct: 153 PPANENLMELKIMIDACRRASAKNITAVIPYFGY 186


>Glyma17g16400.1 
          Length = 406

 Score =  203 bits (516), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 120/154 (77%), Gaps = 5/154 (3%)

Query: 17  FVTKQR-RFPLRHGVRCNVVEPLNFDNGKPCVPLLSPSAQSFPSFLASNTDLESCIANKH 75
           FV   R R    + V+C++ E  NF NGKP +P+L+   ++ P F+ S    E+   +++
Sbjct: 37  FVDHSRARISAPNTVKCDMSESSNFVNGKPIIPVLNE--RTLPKFMESAR--EAKTVSRN 92

Query: 76  YTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTC 135
             RL++FSG ANP LSQEIA YMGLELGKI IKRFADGEIYVQLQESVRGC+VYL+QPTC
Sbjct: 93  SNRLKLFSGRANPTLSQEIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTC 152

Query: 136 PPANENLMELLIMIDACRRASAKNITAVIPYFGY 169
           PPANENLMEL IMIDACRRASAKNITAVIPYFGY
Sbjct: 153 PPANENLMELKIMIDACRRASAKNITAVIPYFGY 186


>Glyma17g16400.3 
          Length = 405

 Score =  200 bits (509), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 117/153 (76%), Gaps = 4/153 (2%)

Query: 17  FVTKQRRFPLRHGVRCNVVEPLNFDNGKPCVPLLSPSAQSFPSFLASNTDLESCIANKHY 76
           FV   R        +C++ E  NF NGKP +P+L+   ++ P F+ S    E+   +++ 
Sbjct: 37  FVDHSRARISAPNTKCDMSESSNFVNGKPIIPVLNE--RTLPKFMESAR--EAKTVSRNS 92

Query: 77  TRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCP 136
            RL++FSG ANP LSQEIA YMGLELGKI IKRFADGEIYVQLQESVRGC+VYL+QPTCP
Sbjct: 93  NRLKLFSGRANPTLSQEIARYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTCP 152

Query: 137 PANENLMELLIMIDACRRASAKNITAVIPYFGY 169
           PANENLMEL IMIDACRRASAKNITAVIPYFGY
Sbjct: 153 PANENLMELKIMIDACRRASAKNITAVIPYFGY 185


>Glyma17g16400.2 
          Length = 352

 Score =  196 bits (498), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 96/134 (71%), Positives = 110/134 (82%), Gaps = 4/134 (2%)

Query: 36  EPLNFDNGKPCVPLLSPSAQSFPSFLASNTDLESCIANKHYTRLRIFSGTANPALSQEIA 95
           E  NF NGKP +P+L+   ++ P F+ S    E+   +++  RL++FSG ANP LSQEIA
Sbjct: 3   ESSNFVNGKPIIPVLNE--RTLPKFMESAR--EAKTVSRNSNRLKLFSGRANPTLSQEIA 58

Query: 96  CYMGLELGKIKIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRA 155
            YMGLELGKI IKRFADGEIYVQLQESVRGC+VYL+QPTCPPANENLMEL IMIDACRRA
Sbjct: 59  RYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTCPPANENLMELKIMIDACRRA 118

Query: 156 SAKNITAVIPYFGY 169
           SAKNITAVIPYFGY
Sbjct: 119 SAKNITAVIPYFGY 132