Jatropha Genome Database

JcCB0053181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053181.10 + phase: 0 /partial
         (490 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g01170.1                                                       493   e-139
Glyma15g38680.1                                                        74   3e-13

>Glyma13g01170.1 
          Length = 839

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/431 (58%), Positives = 301/431 (69%), Gaps = 41/431 (9%)

Query: 64  FPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFLYLKPVQTGFP 123
            PL+HPIY+IWGSNT +GKTLVS G+A++FLLS P             F YLKP+QTGFP
Sbjct: 29  LPLSHPIYLIWGSNTGVGKTLVSAGIAAAFLLSSP---------TPSQFHYLKPLQTGFP 79

Query: 124 SDSDSHFVFSKLSSLASRYNP--PFXXXXXXXXXXXXXXXXXXFGGCFETNEFKYGMYNL 181
           SDSDS FVF+KL  L+   NP  P                     G              
Sbjct: 80  SDSDSRFVFNKLRQLSLIRNPHIPLSASHRVINVSPAVTASNPLAG-------------- 125

Query: 182 NFNEKKKVLRDEAGVS---ELICETLYAWKEAVSPHLAAERENGVVEDSAVMEMLEQCLS 238
                      E GV    EL+C+TLYAW+EAVSPHLAAERE  VV+DSAV+E L +CL 
Sbjct: 126 -----------EEGVGPPPELLCKTLYAWEEAVSPHLAAEREGLVVKDSAVLETLGECLE 174

Query: 239 NELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGTI 298
           +  +     E  +  CVVETAGGVASPGPSG+LQCDLYRPFR P VLVGDGRLGGISGTI
Sbjct: 175 DVAECGAGKERSEVLCVVETAGGVASPGPSGSLQCDLYRPFRIPAVLVGDGRLGGISGTI 234

Query: 299 SAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNRXXXXXXXXXXQDMSNDLVEWFGSS 358
           SAYESLKLRGYD+VAVVFEDHGL+NE PL+SY++N+          +D  NDL+EWF SS
Sbjct: 235 SAYESLKLRGYDVVAVVFEDHGLLNEGPLMSYMRNKVPVLVLPPIPKDPLNDLMEWFESS 294

Query: 359 SEPFNSLQGILLSAFSERLRRLKEMPKKATDVFWWPFTQHKLVPEETVTVIDSRCGENFA 418
              F++L+ I+LSA+ ER+++L +MP++A D+ WWPFTQHKLVP+  VTVIDSRCGENF+
Sbjct: 295 HYIFSNLKEIMLSAYFERIKKLHDMPREARDIIWWPFTQHKLVPDGGVTVIDSRCGENFS 354

Query: 419 VYKAQNKDFITEQFDACASWWTQGPNATLQIELARDMGYAAGRFGHVMFPENVYEPALKC 478
           ++K    + I  QFDACASWWTQGP+A +Q ELAR+MGYAA RFGHVMFPENV+EPAL C
Sbjct: 355 IFK--KTEVIAPQFDACASWWTQGPDAIMQTELAREMGYAAARFGHVMFPENVHEPALNC 412

Query: 479 AELLLEGVGKG 489
           AELLL+GVGKG
Sbjct: 413 AELLLQGVGKG 423


>Glyma15g38680.1 
          Length = 152

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 41/149 (27%)

Query: 189 VLRDEAGVS---ELICETLYAWKEAVSPHLAAERENGVVEDSAVMEMLEQCLSNELKFEG 245
           +L DE GV    EL+C+TLYAW+EAVSP LA ERE  V +DS V+E L +CL++  ++  
Sbjct: 5   LLADEEGVGPPLELLCKTLYAWEEAVSPLLATEREGLVPKDSTVLETLGECLNDVAEWGA 64

Query: 246 ENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGGISGTISAYESLK 305
             E +                             + P           +   ++ ++   
Sbjct: 65  SKERL---------------------------LVKLP-----------VQDLLARFDVTC 86

Query: 306 LRGYDIVAVVFEDHGLVNEVPLLSYLQNR 334
               D+V VVFEDH L+NE PL+SY++N+
Sbjct: 87  TESTDVVDVVFEDHDLLNEGPLMSYMRNK 115