Jatropha Genome Database

JcCB0050881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050881.10 + phase: 0 /pseudo/partial
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04780.2                                                       427   e-120
Glyma14g04780.1                                                       427   e-120
Glyma02g44090.2                                                       427   e-120
Glyma02g44090.1                                                       427   e-120
Glyma02g08970.1                                                        74   2e-13
Glyma02g08950.1                                                        60   2e-09
Glyma11g24380.1                                                        57   2e-08
Glyma11g01210.1                                                        50   2e-06
Glyma07g17410.1                                                        50   2e-06

>Glyma14g04780.2 
          Length = 309

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/249 (83%), Positives = 217/249 (87%), Gaps = 2/249 (0%)

Query: 31  LNYKKSLKDYCDGNS--LTVVLKDLGPQVSYRTLFFWEYLGXXXXXXXXXXXXXXQYFGY 88
           LNYKKSLKDY  GNS  LTVV KDLGPQVSYRTLFF EYLG              QYFGY
Sbjct: 61  LNYKKSLKDYTSGNSETLTVVFKDLGPQVSYRTLFFCEYLGPLLLYPVFYYLPVYQYFGY 120

Query: 89  KGERVIQPVQTYALLYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYIAY 148
           KGERVI PVQTYAL YWCFHY KRI+ETFFVHRFSHATSPLSNVFRNCAYYWTFG YIAY
Sbjct: 121 KGERVIHPVQTYALYYWCFHYAKRILETFFVHRFSHATSPLSNVFRNCAYYWTFGSYIAY 180

Query: 149 YVNHPLYTPVSDLQWKIGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVT 208
           YVNHPLYTPV+DLQ KIGF  G++CQ++NFYCHI+LKNLRSP G GGYQIPRGFLF+IVT
Sbjct: 181 YVNHPLYTPVNDLQMKIGFAIGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVT 240

Query: 209 CANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWALAKHRRLKKLFDGKDGRPKYPR 268
           CANYTTEIYQWLGFNIATQTVAGYIFLVVA  IMTNWALAKHRRLKKLFDGK+GRP+YPR
Sbjct: 241 CANYTTEIYQWLGFNIATQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPR 300

Query: 269 RWVILPPFL 277
           RWV LPPFL
Sbjct: 301 RWVTLPPFL 309


>Glyma14g04780.1 
          Length = 309

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/249 (83%), Positives = 217/249 (87%), Gaps = 2/249 (0%)

Query: 31  LNYKKSLKDYCDGNS--LTVVLKDLGPQVSYRTLFFWEYLGXXXXXXXXXXXXXXQYFGY 88
           LNYKKSLKDY  GNS  LTVV KDLGPQVSYRTLFF EYLG              QYFGY
Sbjct: 61  LNYKKSLKDYTSGNSETLTVVFKDLGPQVSYRTLFFCEYLGPLLLYPVFYYLPVYQYFGY 120

Query: 89  KGERVIQPVQTYALLYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYIAY 148
           KGERVI PVQTYAL YWCFHY KRI+ETFFVHRFSHATSPLSNVFRNCAYYWTFG YIAY
Sbjct: 121 KGERVIHPVQTYALYYWCFHYAKRILETFFVHRFSHATSPLSNVFRNCAYYWTFGSYIAY 180

Query: 149 YVNHPLYTPVSDLQWKIGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVT 208
           YVNHPLYTPV+DLQ KIGF  G++CQ++NFYCHI+LKNLRSP G GGYQIPRGFLF+IVT
Sbjct: 181 YVNHPLYTPVNDLQMKIGFAIGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVT 240

Query: 209 CANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWALAKHRRLKKLFDGKDGRPKYPR 268
           CANYTTEIYQWLGFNIATQTVAGYIFLVVA  IMTNWALAKHRRLKKLFDGK+GRP+YPR
Sbjct: 241 CANYTTEIYQWLGFNIATQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPR 300

Query: 269 RWVILPPFL 277
           RWV LPPFL
Sbjct: 301 RWVTLPPFL 309


>Glyma02g44090.2 
          Length = 309

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/249 (83%), Positives = 219/249 (87%), Gaps = 2/249 (0%)

Query: 31  LNYKKSLKDYCDGNS--LTVVLKDLGPQVSYRTLFFWEYLGXXXXXXXXXXXXXXQYFGY 88
           LNYKKSLKDY  GNS  LTVV KDLGPQVSYRTLFF EYLG              QYFGY
Sbjct: 61  LNYKKSLKDYTIGNSETLTVVFKDLGPQVSYRTLFFCEYLGPLLLYPVFYYLPVYQYFGY 120

Query: 89  KGERVIQPVQTYALLYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYIAY 148
           KGERVI PVQTYAL YWCFHY KRI+ETFFVH FSHATSPLSNVFRNCAYYWTFG YIAY
Sbjct: 121 KGERVIHPVQTYALYYWCFHYAKRILETFFVHCFSHATSPLSNVFRNCAYYWTFGSYIAY 180

Query: 149 YVNHPLYTPVSDLQWKIGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVT 208
           YVNHPLYTPV+DLQ KIGFGFG++CQ++NFYCHI+LKNLRSP G GGYQIPRGFLF+IVT
Sbjct: 181 YVNHPLYTPVNDLQMKIGFGFGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVT 240

Query: 209 CANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWALAKHRRLKKLFDGKDGRPKYPR 268
           CANYTTEIYQWLGFNIATQTVAGYIFLVVA  IMTNWALAKHRRLKKLFDGK+GRP+YPR
Sbjct: 241 CANYTTEIYQWLGFNIATQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPR 300

Query: 269 RWVILPPFL 277
           RWVILPPFL
Sbjct: 301 RWVILPPFL 309


>Glyma02g44090.1 
          Length = 309

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/249 (83%), Positives = 219/249 (87%), Gaps = 2/249 (0%)

Query: 31  LNYKKSLKDYCDGNS--LTVVLKDLGPQVSYRTLFFWEYLGXXXXXXXXXXXXXXQYFGY 88
           LNYKKSLKDY  GNS  LTVV KDLGPQVSYRTLFF EYLG              QYFGY
Sbjct: 61  LNYKKSLKDYTIGNSETLTVVFKDLGPQVSYRTLFFCEYLGPLLLYPVFYYLPVYQYFGY 120

Query: 89  KGERVIQPVQTYALLYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYIAY 148
           KGERVI PVQTYAL YWCFHY KRI+ETFFVH FSHATSPLSNVFRNCAYYWTFG YIAY
Sbjct: 121 KGERVIHPVQTYALYYWCFHYAKRILETFFVHCFSHATSPLSNVFRNCAYYWTFGSYIAY 180

Query: 149 YVNHPLYTPVSDLQWKIGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVT 208
           YVNHPLYTPV+DLQ KIGFGFG++CQ++NFYCHI+LKNLRSP G GGYQIPRGFLF+IVT
Sbjct: 181 YVNHPLYTPVNDLQMKIGFGFGILCQISNFYCHIILKNLRSPGGEGGYQIPRGFLFNIVT 240

Query: 209 CANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWALAKHRRLKKLFDGKDGRPKYPR 268
           CANYTTEIYQWLGFNIATQTVAGYIFLVVA  IMTNWALAKHRRLKKLFDGK+GRP+YPR
Sbjct: 241 CANYTTEIYQWLGFNIATQTVAGYIFLVVATFIMTNWALAKHRRLKKLFDGKEGRPRYPR 300

Query: 269 RWVILPPFL 277
           RWVILPPFL
Sbjct: 301 RWVILPPFL 309


>Glyma02g08970.1 
          Length = 266

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 3/132 (2%)

Query: 106 CFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYI-AYYVNHPLYTPVSDLQWK 164
             H+FKR+ E  F+H++S A    S +    +Y+ +    I A ++   L  P  DL + 
Sbjct: 101 TLHFFKRVFEVVFIHKYSGAMLLDSAIPITLSYFLSTATMIYAQHLTQGLPEPPIDLLYP 160

Query: 165 IGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVTCANYTTEIYQWLGFNI 224
            G    ++  + NFY H LL NLR   G   Y+IP+G +F++V C +Y  EI ++ GF+ 
Sbjct: 161 -GIVLFVVGIIGNFYHHYLLSNLRG-KGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSF 218

Query: 225 ATQTVAGYIFLV 236
            +QT+  + F V
Sbjct: 219 ISQTLYAFSFTV 230


>Glyma02g08950.1 
          Length = 266

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 106 CFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYI-AYYVNHPLYTPVSDLQWK 164
             HYFKR+ E  F+H++S   +  S +    +Y+ +    + + ++      P  +L + 
Sbjct: 101 TLHYFKRVFEVLFIHKYSGGMTLESAIPITLSYFLSAVTMVYSQHLTKGFPEPPINLFYP 160

Query: 165 IGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVTCANYTTEIYQWLGFNI 224
            G    L+  + NFY H LL  LR   G   Y+IP+G  F++V C +Y  EI  + G   
Sbjct: 161 -GIVLFLVGIIGNFYHHYLLSKLRG-KGEKEYKIPKGGFFELVICPHYFFEITVFYGIFF 218

Query: 225 ATQTVAGYIFLVVAAMIMT-------NWALAKHRRLKK 255
            +QT+  + F V   M +         W L+K     K
Sbjct: 219 ISQTLYSFAFAVGTTMYLVGRSYSTRKWYLSKFEDFPK 256


>Glyma11g24380.1 
          Length = 94

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/30 (83%), Positives = 27/30 (90%)

Query: 91  ERVIQPVQTYALLYWCFHYFKRIMETFFVH 120
           ERVI PVQTYAL YWCFHY KRI+ETFF+H
Sbjct: 1   ERVIHPVQTYALYYWCFHYAKRILETFFMH 30


>Glyma11g01210.1 
          Length = 263

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 187 LRSPDGGGGYQIPRGFLFDIVTCANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWA 246
           LR    G GY +PRG LF++V C NY  EI +WLG+ + T + AG  F V     +   A
Sbjct: 177 LRLKSEGKGYVVPRGGLFELVACPNYFGEIVEWLGWAVMTWSWAGLGFFVYTFANLGPRA 236

Query: 247 LAKHRRLKKLFDGKDGRPKYPRRWVILPPFL 277
            A  R   + F G+D    YP+    + P+L
Sbjct: 237 RANRRWYLEKF-GED----YPKERKAVIPYL 262


>Glyma07g17410.1 
          Length = 263

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 187 LRSPDGGGGYQIPRGFLFDIVTCANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWA 246
           LR    G GY +PRG LF++V C NY  EI +WLG+ + T + AG  F V     +   A
Sbjct: 177 LRLKSEGKGYVVPRGGLFELVACPNYFGEIVEWLGWAVMTWSWAGLGFFVYTFANLGPRA 236

Query: 247 LAKHRRLKKLFDGKDGRPKYPRRWVILPPFL 277
            A  R   + F G+D    YP+    + P+L
Sbjct: 237 RANRRWYLEKF-GED----YPKERKAVIPYL 262